RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 PDE8BO95263 885 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 PDE1AP54750 535 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 CCDC24Q8N4L8 307 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 ANKRD2Q9GZV1 360 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 C10orf71Q711Q0 1435 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 TNRC6CQ9HCJ0 1690 aaKnown RBP17.35■□□□□ 0.37
CACNB3-211ENST00000549226 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
CACNB3-211ENST00000549226 ZNF609O15014 1411 aa17.34■□□□□ 0.37
CACNB3-211ENST00000549226 SRGNP10124 158 aa17.34■□□□□ 0.37
CACNB3-211ENST00000549226 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
CACNB3-211ENST00000549226 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
CACNB3-211ENST00000549226 VGLL2Q8N8G2 317 aa17.34■□□□□ 0.37
CACNB3-211ENST00000549226 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-211ENST00000549226 MASTLQ96GX5 879 aa17.34■□□□□ 0.37
CACNB3-211ENST00000549226 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
CACNB3-211ENST00000549226 STYK1Q6J9G0 422 aa17.33■□□□□ 0.36
CACNB3-211ENST00000549226 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-211ENST00000549226 LPIN2Q92539 896 aa17.33■□□□□ 0.36
CACNB3-211ENST00000549226 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
CACNB3-211ENST00000549226 PDGFDQ9GZP0 370 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-211ENST00000549226 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.36
CACNB3-211ENST00000549226 H0YIN7 160 aa17.32■□□□□ 0.36
CACNB3-211ENST00000549226 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
CACNB3-211ENST00000549226 A0A1B0GUL7 405 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 CHRNDQ07001 517 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 UBE4AQ14139 1066 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-211ENST00000549226 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
CACNB3-211ENST00000549226 EIF5BO60841 1220 aaKnown RBP17.3■□□□□ 0.36
CACNB3-211ENST00000549226 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
CACNB3-211ENST00000549226 SLC5A1P13866 664 aa17.3■□□□□ 0.36
CACNB3-211ENST00000549226 FGFR2P21802 821 aa17.3■□□□□ 0.36
CACNB3-211ENST00000549226 C2CD5Q86YS7 1000 aa17.3■□□□□ 0.36
CACNB3-211ENST00000549226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNB3-211ENST00000549226 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
CACNB3-211ENST00000549226 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-211ENST00000549226 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
CACNB3-211ENST00000549226 CCDC158Q5M9N0 1113 aa17.29■□□□□ 0.36
CACNB3-211ENST00000549226 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
CACNB3-211ENST00000549226 CCDC8Q9H0W5 538 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-211ENST00000549226 XDHP47989 1333 aa17.28■□□□□ 0.36
CACNB3-211ENST00000549226 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-211ENST00000549226 ATP5JP18859 108 aa17.28■□□□□ 0.36
CACNB3-211ENST00000549226 TGFB2P61812 414 aa17.28■□□□□ 0.36
CACNB3-211ENST00000549226 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
CACNB3-211ENST00000549226 PI4K2BQ8TCG2 481 aa17.28■□□□□ 0.36
CACNB3-211ENST00000549226 ZNF512BQ96KM6 892 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-211ENST00000549226 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
CACNB3-211ENST00000549226 ZBTB22O15209 634 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 XAGE2Q96GT9 111 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 PODXL2Q9NZ53 605 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.36
CACNB3-211ENST00000549226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-211ENST00000549226 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.35
CACNB3-211ENST00000549226 UQCRFS1P1P0C7P4 283 aa17.26■□□□□ 0.35
CACNB3-211ENST00000549226 KCNJ4P48050 445 aa17.26■□□□□ 0.35
CACNB3-211ENST00000549226 TIMM10P62072 90 aa17.26■□□□□ 0.35
CACNB3-211ENST00000549226 CC2D2BQ6DHV5 1058 aa17.26■□□□□ 0.35
CACNB3-211ENST00000549226 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
CACNB3-211ENST00000549226 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
CACNB3-211ENST00000549226 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
CACNB3-211ENST00000549226 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
CACNB3-211ENST00000549226 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
CACNB3-211ENST00000549226 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
CACNB3-211ENST00000549226 ATP2B4P23634 1241 aa17.25■□□□□ 0.35
CACNB3-211ENST00000549226 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
CACNB3-211ENST00000549226 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNB3-211ENST00000549226 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
CACNB3-211ENST00000549226 CASC1Q6TDU7 716 aa17.24■□□□□ 0.35
CACNB3-211ENST00000549226 C15orf52Q6ZUT6 534 aaKnown RBP17.24■□□□□ 0.35
CACNB3-211ENST00000549226 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
CACNB3-211ENST00000549226 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
CACNB3-211ENST00000549226 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
CACNB3-211ENST00000549226 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
CACNB3-211ENST00000549226 TAF5LO75529 589 aa17.23■□□□□ 0.35
CACNB3-211ENST00000549226 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
CACNB3-211ENST00000549226 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
CACNB3-211ENST00000549226 HAUS7Q99871 368 aa17.23■□□□□ 0.35
CACNB3-211ENST00000549226 GNL3LQ9NVN8 582 aaKnown RBP17.23■□□□□ 0.35
CACNB3-211ENST00000549226 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
CACNB3-211ENST00000549226 CDC45O75419 566 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 SDSP20132 328 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 ARID4AP29374 1257 aaPredicted RBP17.22■□□□□ 0.35
CACNB3-211ENST00000549226 PTGER2P43116 358 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
CACNB3-211ENST00000549226 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 COL4A1P02462 1669 aa17.22■□□□□ 0.35
CACNB3-211ENST00000549226 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.35
CACNB3-211ENST00000549226 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms