RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 CBX1P83916 185 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 HAUS7Q99871 368 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 ZNF609O15014 1411 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 C5P01031 1676 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 SCRN1Q12765 414 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 STX1AQ16623 288 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 RABL6Q3YEC7 729 aaPredicted RBP11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 PRDM10Q9NQV6 1147 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 SH3TC1Q8TE82 1336 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 NCBP1Q09161 790 aaKnown RBP11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 MYD88Q99836 296 aa11.61□□□□□ -0.55
SMARCD1-205ENST00000548573 RBM6P78332 1123 aaKnown RBP11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 TFCP2Q12800 502 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 CCDC144BQ3MJ40 725 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 NSUN7Q8NE18 718 aaKnown RBP11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 AGXT2Q9BYV1 514 aa11.6□□□□□ -0.55
SMARCD1-205ENST00000548573 TPD52L1Q16890 204 aaPredicted RBP11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 CCAR1Q8IX12 1150 aaKnown RBP11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 KBTBD3Q8NAB2 608 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 CCDC112Q8NEF3 446 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 PALLDQ8WX93 1383 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 CHMP4CQ96CF2 233 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 SCN11AQ9UI33 1791 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.554e-7■■□□□ 13.2
SMARCD1-205ENST00000548573 FGD1P98174 961 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 CCDC129Q6ZRS4 1044 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 DSCC1Q9BVC3 393 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 SLC52A2Q9HAB3 445 aa11.59□□□□□ -0.55
SMARCD1-205ENST00000548573 MYL6BP14649 208 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 STOX1Q6ZVD7 989 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 ENGASEQ8NFI3 743 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 DNAJC2Q99543 621 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 DBNDD2Q9BQY9 259 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 HELLSQ9NRZ9 838 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 KCND1Q9NSA2 647 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 ANO10Q9NW15 660 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 CGNQ9P2M7 1197 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 LAMA4Q16363 1823 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 SALL1Q9NSC2 1324 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 BECN2A8MW95 431 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 CTDNEP1O95476 244 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 EXOSC10Q01780 885 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 FAM160A1Q05DH4 1040 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 CEP135Q66GS9 1140 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 OGFRQ9NZT2 677 aa11.58□□□□□ -0.56
SMARCD1-205ENST00000548573 KDM6AO15550 1401 aaPredicted RBP11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 SLC39A6Q13433 755 aa11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 NYAP1Q6ZVC0 841 aa11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 DHX40Q8IX18 779 aaKnown RBP11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 USP28Q96RU2 1077 aa11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 GOLPH3LQ9H4A5 285 aa11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 AFDNP55196 1824 aaKnown RBP11.57□□□□□ -0.56
SMARCD1-205ENST00000548573 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 KIF20AO95235 890 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 CEBPZQ03701 1054 aaKnown RBP11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 DDX46Q7L014 1031 aaKnown RBP11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 NAT10Q9H0A0 1025 aaKnown RBP11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 ERBB3P21860 1342 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 CHGBP05060 677 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 SNRPA1P09661 255 aaKnown RBP11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 SKILP12757 684 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 UBE3BQ7Z3V4 1068 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 CEP57L1Q8IYX8 460 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 FBXL16Q8N461 479 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 GPR108Q9NPR9 543 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 NDUFB9Q9Y6M9 179 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
SMARCD1-205ENST00000548573 TRPM3Q9HCF6 1732 aaPredicted RBP11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 PHKG2P15735 406 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms