RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 ALDH1L1O75891 902 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 GSDMDP57764 484 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 TMX1Q9H3N1 280 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 OGFRQ9NZT2 677 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 EPB41L2O43491 1005 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 RPS6KB1P23443 525 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 EIF4A1P60842 406 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 HAND2P61296 217 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 ZNF790Q6PG37 636 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 CLSTN2Q9H4D0 955 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 MYO3AQ8NEV4 1616 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 CPSF1Q10570 1443 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 NR1I2O75469 434 aa11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 HMGB1P09429 215 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 ERCC4Q92889 916 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 ZC3H13Q5T200 1668 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-210ENST00000548263 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 LINS1Q8NG48 757 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 TM6SF1Q9BZW5 370 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 SLU7O95391 586 aaKnown RBP11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 APOBRQ0VD83 1088 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 CCDC158Q5M9N0 1113 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 TTC39AQ5SRH9 613 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 CCDC129Q6ZRS4 1044 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
CALCOCO1-210ENST00000548263 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 CBFA2T2O43439 604 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 SNRPA1P09661 255 aaKnown RBP11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 TAF3Q5VWG9 929 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 ORC3Q9UBD5 711 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 DNAI1Q9UI46 699 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 BMS1Q14692 1282 aaKnown RBP11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 MRPS27Q92552 414 aaKnown RBP11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 MRVI1Q9Y6F6 885 aa11.03□□□□□ -0.64
CALCOCO1-210ENST00000548263 A0A1B0GVL5 298 aa11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 KIF20AO95235 890 aa11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 IMMTQ16891 758 aaKnown RBP11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 TSR1Q2NL82 804 aaKnown RBP11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 SYT10Q6XYQ8 523 aa11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 KIF6Q6ZMV9 814 aa11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 ZNF397Q8NF99 534 aaPredicted RBP11.02□□□□□ -0.64
CALCOCO1-210ENST00000548263 A0A0D9SFI3 127 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 GTF2F1P35269 517 aaKnown RBP eCLIP11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 DHX8Q14562 1220 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 PI4K2BQ8TCG2 481 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 EAF2Q96CJ1 260 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 IFNKQ9P0W0 207 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 PTPDC1A2A3K4 754 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 GOLGA8BA8MQT2 603 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 HSP90B2PQ58FF3 399 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 LMBR1LQ6UX01 489 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
CALCOCO1-210ENST00000548263 SKIDA1Q1XH10 827 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 CDK12Q9NYV4 1490 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 CCDC57Q2TAC2 916 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 TMEM87AQ8NBN3 555 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 IL25Q9H293 177 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 A0A087WWV3 80 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 KCNQ4P56696 695 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 DMTNQ08495 405 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 ELF2Q15723 593 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 SUCLG2Q96I99 432 aa11.01□□□□□ -0.65
CALCOCO1-210ENST00000548263 ARHGEF28Q8N1W1 1705 aaKnown RBP11□□□□□ -0.65
CALCOCO1-210ENST00000548263 EXOC5O00471 708 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 MARCKSP29966 332 aaPredicted RBP11□□□□□ -0.65
CALCOCO1-210ENST00000548263 FAM182BQ5T319 152 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 CACTINQ8WUQ7 758 aaKnown RBP11□□□□□ -0.65
CALCOCO1-210ENST00000548263 ZSWIM4Q9H7M6 989 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 MYOM1P52179 1685 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 ERICH2A1L162 156 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 IL2RBP14784 551 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 TFCP2Q12800 502 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 ATP2B3Q16720 1220 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 CCDC82Q8N4S0 544 aa11□□□□□ -0.65
CALCOCO1-210ENST00000548263 ZBTB9Q96C00 473 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms