RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 C3orf67Q6ZVT6 689 aa9.91□□□□□ -0.82
CCDC65-203ENST00000547861 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
CCDC65-203ENST00000547861 PLBD2Q8NHP8 589 aa9.91□□□□□ -0.82
CCDC65-203ENST00000547861 KIF2CQ99661 725 aa9.91□□□□□ -0.82
CCDC65-203ENST00000547861 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
CCDC65-203ENST00000547861 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.82
CCDC65-203ENST00000547861 MMRN1Q13201 1228 aa9.9□□□□□ -0.82
CCDC65-203ENST00000547861 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
CCDC65-203ENST00000547861 NUTM1Q86Y26 1132 aa9.9□□□□□ -0.82
CCDC65-203ENST00000547861 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
CCDC65-203ENST00000547861 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
CCDC65-203ENST00000547861 PA2G4Q9UQ80 394 aaKnown RBP9.9□□□□□ -0.82
CCDC65-203ENST00000547861 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
CCDC65-203ENST00000547861 A1BGP04217 495 aa9.9□□□□□ -0.83
CCDC65-203ENST00000547861 PSEN1P49768 467 aa9.9□□□□□ -0.83
CCDC65-203ENST00000547861 OS9Q13438 667 aaPredicted RBP9.9□□□□□ -0.83
CCDC65-203ENST00000547861 RC3H1Q5TC82 1133 aaKnown RBP9.9□□□□□ -0.83
CCDC65-203ENST00000547861 TTLL7Q6ZT98 887 aa9.9□□□□□ -0.83
CCDC65-203ENST00000547861 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.83
CCDC65-203ENST00000547861 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
CCDC65-203ENST00000547861 HSCBQ8IWL3 235 aa9.89□□□□□ -0.83
CCDC65-203ENST00000547861 NLGN1Q8N2Q7 840 aa9.89□□□□□ -0.83
CCDC65-203ENST00000547861 PI4K2BQ8TCG2 481 aa9.89□□□□□ -0.83
CCDC65-203ENST00000547861 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
CCDC65-203ENST00000547861 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
CCDC65-203ENST00000547861 DDX60Q8IY21 1712 aaKnown RBP9.89□□□□□ -0.83
CCDC65-203ENST00000547861 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 ERC2O15083 957 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 RFC4P35249 363 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 CASP7P55210 303 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 UBE3BQ7Z3V4 1068 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 ERC1Q8IUD2 1116 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 SNX21Q969T3 373 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 SLKQ9H2G2 1235 aaPredicted RBP9.88□□□□□ -0.83
CCDC65-203ENST00000547861 CNTNAP4Q9C0A0 1308 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 ARAP2Q8WZ64 1704 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 A0A1B0GUL6 1792 aa9.88□□□□□ -0.83
CCDC65-203ENST00000547861 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 GYS1P13807 737 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 USP26Q9BXU7 913 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 ANTXR1Q9H6X2 564 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 KIF13BQ9NQT8 1826 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 A0A0G2JLW4 131 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 REC8O95072 547 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 RABL6Q3YEC7 729 aaPredicted RBP9.87□□□□□ -0.83
CCDC65-203ENST00000547861 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
CCDC65-203ENST00000547861 DNAJC10Q8IXB1 793 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 JARID2Q92833 1246 aaPredicted RBP9.87□□□□□ -0.83
CCDC65-203ENST00000547861 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
CCDC65-203ENST00000547861 LAMA4Q16363 1823 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 SCN7AQ01118 1682 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 KIAA1551Q9HCM1 1747 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 A0A087WZG4 1122 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 SASH1O94885 1247 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 CHMLP26374 656 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 CRKLP46109 303 aaKnown RBP9.86□□□□□ -0.83
CCDC65-203ENST00000547861 RFX5P48382 616 aaPredicted RBP9.86□□□□□ -0.83
CCDC65-203ENST00000547861 TGFB2P61812 414 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 CLASRPQ8N2M8 674 aaKnown RBP9.86□□□□□ -0.83
CCDC65-203ENST00000547861 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
CCDC65-203ENST00000547861 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 C4AP0C0L4 1744 aa9.86□□□□□ -0.83
CCDC65-203ENST00000547861 C10orf71Q711Q0 1435 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 CD2BP2O95400 341 aaKnown RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 G3BP1Q13283 466 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 KLHDC4Q8TBB5 520 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 SIL1Q9H173 461 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 CWC25Q9NXE8 425 aaPredicted RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 MYO5AQ9Y4I1 1855 aaKnown RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 H7C1W4 665 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 GLRX3O76003 335 aaKnown RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 MAP4K4O95819 1239 aaPredicted RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 DPEP1P16444 411 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 RABEP1Q15276 862 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 AACSQ86V21 672 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 GPATCH3Q96I76 525 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
CCDC65-203ENST00000547861 COPRSQ9NQ92 184 aa9.85□□□□□ -0.83
CCDC65-203ENST00000547861 IFIT2P09913 472 aaKnown RBP9.84□□□□□ -0.83
CCDC65-203ENST00000547861 EMP3P54852 163 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 PTPN12Q05209 780 aaKnown RBP9.84□□□□□ -0.83
CCDC65-203ENST00000547861 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
CCDC65-203ENST00000547861 ARHGAP27Q6ZUM4 889 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 CNTROBQ8N137 903 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 SPRYD3Q8NCJ5 442 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 CCDC191Q8NCU4 936 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 AKAP11Q9UKA4 1901 aa9.84□□□□□ -0.83
CCDC65-203ENST00000547861 ZNF609O15014 1411 aa9.83□□□□□ -0.84
CCDC65-203ENST00000547861 FOXO4P98177 505 aa9.83□□□□□ -0.84
CCDC65-203ENST00000547861 INTS5Q6P9B9 1019 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms