RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 USP17L13C9JLJ4 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L12C9JPN9 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L11C9JVI0 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L21D6R901 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L18D6R9N7 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L22D6RA61 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L17D6RBQ6 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L19D6RCP7 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L20D6RJB6 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 TGFB1P01137 390 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 SPINK2P20155 84 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 USP17L24Q0WX57 530 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 FAM117BQ6P1L5 589 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 ZDHHC13Q8IUH4 622 aa5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 UTP4Q969X6 686 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 TFIP11Q9UBB9 837 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-204ENST00000547823 FAM177BA6PVY3 158 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 SMNDC1O75940 238 aaKnown RBP eCLIP5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 WEE1P30291 646 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 RNF43Q68DV7 783 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 NLRP13Q86W25 1043 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 DTX1Q86Y01 620 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 KLHL23Q8NBE8 558 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 GLMNQ92990 594 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 SPACA7Q96KW9 195 aa5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 NSUN5Q96P11 429 aaKnown RBP5.45□□□□□ -1.54
DEPDC4-204ENST00000547823 J3QW42 95 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 OPLAHO14841 1288 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 MMP20O60882 483 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 WNT11O96014 354 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 CD68P34810 354 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 TPRNQ4KMQ1 711 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 CRTC2Q53ET0 693 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 ACAD11Q709F0 780 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 TREML1Q86YW5 311 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 RGL4Q8IZJ4 473 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 CMTR1Q8N1G2 835 aaKnown RBP5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 AGGF1Q8N302 714 aaeCLIP5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 GIMAP7Q8NHV1 300 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 HIF3AQ9Y2N7 669 aa5.44□□□□□ -1.54
DEPDC4-204ENST00000547823 HYAL2Q12891 473 aa5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 CPSF6Q16630 551 aaKnown RBP eCLIP5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 CLEC10AQ8IUN9 316 aa5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 FAM46AQ96IP4 442 aaKnown RBP5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 MYRFLQ96LU7 910 aa5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 UBL7Q96S82 380 aaPredicted RBP5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 C7orf69Q9H7B7 122 aa5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 VRTNQ9H8Y1 702 aa5.43□□□□□ -1.54
DEPDC4-204ENST00000547823 MED26O95402 600 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 CDC27P30260 824 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 ANKRD34AQ69YU3 496 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 ARMC10Q8N2F6 343 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 OR13H1Q8NG92 308 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 WNT8BQ93098 351 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 TRIM33Q9UPN9 1127 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 FNDC3AQ9Y2H6 1198 aaKnown RBP5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 KCNMB2Q9Y691 235 aa5.42□□□□□ -1.54
DEPDC4-204ENST00000547823 BRD2P25440 801 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 FZD5Q13467 585 aa5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 DUOXA2Q1HG44 320 aa5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 KANK4Q5T7N3 995 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 PIK3R5Q8WYR1 880 aa5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 FAM83CQ9BQN1 747 aa5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 PPP1R12CQ9BZL4 782 aa5.41□□□□□ -1.54
DEPDC4-204ENST00000547823 SART1O43290 800 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-204ENST00000547823 PROSER2Q86WR7 435 aaPredicted RBP5.4□□□□□ -1.54
DEPDC4-204ENST00000547823 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
DEPDC4-204ENST00000547823 FAM20CQ8IXL6 584 aa5.4□□□□□ -1.54
DEPDC4-204ENST00000547823 GALNT11Q8NCW6 608 aa5.4□□□□□ -1.54
DEPDC4-204ENST00000547823 FAM200AQ8TCP9 573 aa5.4□□□□□ -1.54
DEPDC4-204ENST00000547823 PRR19A6NJB7 356 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 LINC01387J3KSC0 135 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 FSCN2O14926 492 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 PTPRAP18433 802 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 CABP4P57796 275 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 TTC39BQ5VTQ0 682 aaPredicted RBP5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 CEP135Q66GS9 1140 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 COL26A1Q96A83 441 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 CALR3Q96L12 384 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 ARXQ96QS3 562 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 RNF208Q9H0X6 261 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 LRFN2Q9ULH4 789 aa5.39□□□□□ -1.55
DEPDC4-204ENST00000547823 UBAP1LF5GYI3 381 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 WISP1O95388 367 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 PIP4K2BP78356 416 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 SWI5Q1ZZU3 235 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 KIAA1211Q6ZU35 1233 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 OSGEPQ9NPF4 335 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 SEC31BQ9NQW1 1179 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 ADGRE2Q9UHX3 823 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 ANGEL1Q9UNK9 670 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 USP20Q9Y2K6 914 aa5.38□□□□□ -1.55
DEPDC4-204ENST00000547823 HMX2A2RU54 273 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 KIF4AO95239 1232 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 SCNN1AP37088 669 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 COX20Q5RI15 118 aa5.37□□□□□ -1.55
DEPDC4-204ENST00000547823 BEND4Q6ZU67 534 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms