RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 PPP1R16BQ96T49 567 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 C19orf44Q9H6X5 657 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 POLMQ9NP87 494 aaPredicted RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 PRDM10Q9NQV6 1147 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 CPDO75976 1380 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 PLEKHG2Q9H7P9 1386 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 NFAT5O94916 1531 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SENP3-EIF4A1A0A087X0R7 540 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 OVOS2A0A0J9YW53 1432 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SYN1P17600 705 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 GP2P55259 537 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 OVOS2Q6IE36 1432 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 INTS5Q6P9B9 1019 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 BARGINQ6ZT62 677 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 UNC5CLQ8IV45 518 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 VPS8Q8N3P4 1428 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SIRT1Q96EB6 747 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 TRPM7Q96QT4 1865 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 GDF2Q9UK05 429 aaPredicted RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 N4BP2Q86UW6 1770 aaPredicted RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 SPATA31A5Q5VU36 1347 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SPATA31A7Q8IWB4 1347 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 ZFHX2Q9C0A1 2572 aaPredicted RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 C9orf172C9J069 976 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 PLSCR1O15162 318 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 WNT11O96014 354 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 PRIM1P49642 420 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 SWT1Q5T5J6 900 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 LCE1EQ5T753 118 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 CCDC155Q8N6L0 562 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 CRAMP1Q96RY5 1269 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 ITGB4P16144 1822 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 OVOS2A0A0G2JMS6 1433 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 NAIPQ13075 1403 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SMAPO00193 183 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 PHF14O94880 888 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 ADH1CP00326 375 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 FSTL1Q12841 308 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 TRIM46Q7Z4K8 759 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 RBM46Q8TBY0 533 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 KLRG1Q96E93 195 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 USP21Q9UK80 565 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 LRPPRCP42704 1394 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 TJP1Q07157 1748 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 COL3A1P02461 1466 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 LTN1O94822 1766 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 DAPK1P53355 1430 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 DDX60Q8IY21 1712 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 RIOK3O14730 519 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 GIGYF1O75420 1035 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 CSRP2Q16527 193 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 OGFOD2Q6N063 350 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 PRRT2Q7Z6L0 340 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 TSEN34Q9BSV6 310 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 MAP10Q9P2G4 905 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 ARHGEF10O15013 1369 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 VPS13CQ709C8 3753 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 SPATA31A3Q5VYP0 1347 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 SYNGAP1Q96PV0 1343 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 PIK3C2GO75747 1445 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 NCAPD2Q15021 1401 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 RAC1P63000 192 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 UBAP2LQ14157 1087 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 PRPF38BQ5VTL8 546 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 GOLGA6L1Q8N7Z2 621 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 PNMA1Q8ND90 353 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 FAM174AQ8TBP5 190 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 FAM53CQ9NYF3 392 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 RBM27Q9P2N5 1060 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 UBR2Q8IWV8 1755 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 MYOM3Q5VTT5 1437 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 SSH2Q76I76 1423 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 ROCK1Q13464 1354 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 CFHP08603 1231 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 SPATA31C1P0DKV0 1188 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 JUNBP17275 347 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 ZNF124Q15973 351 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 RSPO4Q2I0M5 234 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 Q3C1V9 767 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 NKAPLQ5M9Q1 402 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 C6orf132Q5T0Z8 1188 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 TP53INP2Q8IXH6 220 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 EDARADDQ8WWZ3 215 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 SLC52A1Q9NWF4 448 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 RNF112Q9ULX5 631 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 LRRC37AA6NMS7 1700 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 COL11A2P13942 1736 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 FAT3Q8TDW7 4589 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 FAM83GA6ND36 823 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 TTLL8A6PVC2 850 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 GRIN3BO60391 1043 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 WNT7BP56706 349 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 COL9A3Q14050 684 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 COL13A1Q5TAT6 717 aaPredicted RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.68□□□□□ -2.3
CEP290-203ENST00000547691 ZCCHC4Q9H5U6 513 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 THRAP3Q9Y2W1 955 aaKnown RBP0.68□□□□□ -2.3
CEP290-203ENST00000547691 USP19O94966 1318 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 SPATA31A1Q5TZJ5 1347 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms