RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 GSTT1P30711 240 aa10.9□□□□□ -0.66
HIF1A-205ENST00000547430 GRIN2CQ14957 1233 aa10.9□□□□□ -0.66
HIF1A-205ENST00000547430 PRPF40BQ6NWY9 871 aaKnown RBP10.9□□□□□ -0.66
HIF1A-205ENST00000547430 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
HIF1A-205ENST00000547430 TRAK1Q9UPV9 953 aa10.9□□□□□ -0.66
HIF1A-205ENST00000547430 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-205ENST00000547430 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-205ENST00000547430 KIF4AO95239 1232 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 MAP3K6O95382 1288 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 NFKB1P19838 968 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 C3orf58Q8NDZ4 430 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 ZNF837Q96EG3 531 aaPredicted RBP10.89□□□□□ -0.67
HIF1A-205ENST00000547430 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 PNMA5Q96PV4 448 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 EHD4Q9H223 541 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 ACBD3Q9H3P7 528 aa10.89□□□□□ -0.67
HIF1A-205ENST00000547430 TLR7Q9NYK1 1049 aaKnown RBP10.89□□□□□ -0.67
HIF1A-205ENST00000547430 ZNF394Q53GI3 561 aa10.88□□□□□ -0.67
HIF1A-205ENST00000547430 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
HIF1A-205ENST00000547430 SENP2Q9HC62 589 aa10.88□□□□□ -0.67
HIF1A-205ENST00000547430 ATXN7L1Q9ULK2 861 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-205ENST00000547430 RACK1P63244 317 aaKnown RBP10.87□□□□□ -0.67
HIF1A-205ENST00000547430 USP48Q86UV5 1035 aa10.87□□□□□ -0.67
HIF1A-205ENST00000547430 ZNF654Q8IZM8 581 aa10.87□□□□□ -0.67
HIF1A-205ENST00000547430 SRA1Q9HD15 236 aaKnown RBP10.87□□□□□ -0.67
HIF1A-205ENST00000547430 PSAPP07602 524 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 CD33P20138 364 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 ITGA6P23229 1130 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 FAM182BQ5T319 152 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 COL13A1Q5TAT6 717 aaPredicted RBP10.86□□□□□ -0.67
HIF1A-205ENST00000547430 ERMP1Q7Z2K6 904 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 ANKRD24Q8TF21 1146 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 TRIM47Q96LD4 638 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 CAPN10Q9HC96 672 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 ABCB6Q9NP58 842 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 GGT7Q9UJ14 662 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 PCDHGB7Q9Y5F8 929 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 SHROOM4Q9ULL8 1493 aa10.86□□□□□ -0.67
HIF1A-205ENST00000547430 PLAURQ03405 335 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 UBXN4Q92575 508 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 CNTNAP3BQ96NU0 1288 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 TCF12Q99081 682 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 CNTNAP3Q9BZ76 1288 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 LIN7BQ9HAP6 207 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 PPP4R2Q9NY27 417 aa10.85□□□□□ -0.67
HIF1A-205ENST00000547430 TNNI2P48788 182 aa10.84□□□□□ -0.67
HIF1A-205ENST00000547430 HYAL2Q12891 473 aa10.84□□□□□ -0.67
HIF1A-205ENST00000547430 DHX32Q7L7V1 743 aaKnown RBP10.84□□□□□ -0.67
HIF1A-205ENST00000547430 BHMTQ93088 406 aa10.84□□□□□ -0.67
HIF1A-205ENST00000547430 NOC4LQ9BVI4 516 aaKnown RBP10.84□□□□□ -0.67
HIF1A-205ENST00000547430 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
HIF1A-205ENST00000547430 RAB44Q7Z6P3 723 aaPredicted RBP10.83□□□□□ -0.68
HIF1A-205ENST00000547430 NCAPG2Q86XI2 1143 aa10.83□□□□□ -0.68
HIF1A-205ENST00000547430 GTPBP3Q969Y2 492 aaKnown RBP10.83□□□□□ -0.68
HIF1A-205ENST00000547430 ZKSCAN3Q9BRR0 538 aa10.83□□□□□ -0.68
HIF1A-205ENST00000547430 OXCT2Q9BYC2 517 aaPredicted RBP10.83□□□□□ -0.68
HIF1A-205ENST00000547430 PPM1HQ9ULR3 514 aa10.83□□□□□ -0.68
HIF1A-205ENST00000547430 TTF2Q9UNY4 1162 aaKnown RBP10.83□□□□□ -0.68
HIF1A-205ENST00000547430 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 FGFR3P22607 806 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 NRLP54845 237 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 FCGRTP55899 365 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 CCNJLQ8IV13 435 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 CEP120Q8N960 986 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 PHF24Q9UPV7 400 aa10.82□□□□□ -0.68
HIF1A-205ENST00000547430 ACPPP15309 386 aa10.81□□□□□ -0.68
HIF1A-205ENST00000547430 GNL2Q13823 731 aaKnown RBP10.81□□□□□ -0.68
HIF1A-205ENST00000547430 GMLQ99445 158 aa10.81□□□□□ -0.68
HIF1A-205ENST00000547430 OSMRQ99650 979 aa10.81□□□□□ -0.68
HIF1A-205ENST00000547430 MAP3K10Q02779 954 aa10.8□□□□□ -0.68
HIF1A-205ENST00000547430 TANGO6Q9C0B7 1094 aa10.8□□□□□ -0.68
HIF1A-205ENST00000547430 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
HIF1A-205ENST00000547430 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
HIF1A-205ENST00000547430 INPP5FQ9Y2H2 1132 aa10.8□□□□□ -0.68
HIF1A-205ENST00000547430 GPLD1P80108 840 aa10.79□□□□□ -0.68
HIF1A-205ENST00000547430 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
HIF1A-205ENST00000547430 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
HIF1A-205ENST00000547430 TRPM4Q8TD43 1214 aa10.79□□□□□ -0.68
HIF1A-205ENST00000547430 NSUN5Q96P11 429 aaKnown RBP10.79□□□□□ -0.68
HIF1A-205ENST00000547430 RSRP1Q9BUV0 290 aa10.79□□□□□ -0.68
HIF1A-205ENST00000547430 BHLHE41Q9C0J9 482 aaPredicted RBP10.79□□□□□ -0.68
HIF1A-205ENST00000547430 COPRSQ9NQ92 184 aa10.79□□□□□ -0.68
HIF1A-205ENST00000547430 NFKBIEO00221 500 aa10.78□□□□□ -0.68
HIF1A-205ENST00000547430 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-205ENST00000547430 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
HIF1A-205ENST00000547430 ZBTB42B2RXF5 422 aa10.77□□□□□ -0.69
HIF1A-205ENST00000547430 ITPKAP23677 461 aa10.77□□□□□ -0.69
HIF1A-205ENST00000547430 GRIA4P48058 902 aa10.77□□□□□ -0.69
HIF1A-205ENST00000547430 GJA8P48165 433 aa10.77□□□□□ -0.69
HIF1A-205ENST00000547430 TMEM102Q8N9M5 508 aaPredicted RBP10.77□□□□□ -0.69
HIF1A-205ENST00000547430 KBTBD4Q9NVX7 518 aa10.77□□□□□ -0.69
HIF1A-205ENST00000547430 TRPA1O75762 1119 aa10.76□□□□□ -0.69
HIF1A-205ENST00000547430 SNRPBP14678 240 aaKnown RBP10.76□□□□□ -0.69
HIF1A-205ENST00000547430 CTBSQ01459 385 aa10.76□□□□□ -0.69
HIF1A-205ENST00000547430 CCDC85BQ15834 202 aaPredicted RBP10.76□□□□□ -0.69
HIF1A-205ENST00000547430 SPACA7Q96KW9 195 aa10.76□□□□□ -0.69
HIF1A-205ENST00000547430 TRERF1Q96PN7 1200 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms