RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 KAT6BQ8WYB5 2073 aa22.31■■□□□ 1.16
VDR-204ENST00000547065 A0A0G2JS52 829 aa22.31■■□□□ 1.16
VDR-204ENST00000547065 ITGA6P23229 1130 aa22.31■■□□□ 1.16
VDR-204ENST00000547065 ANKRD1Q15327 319 aa22.31■■□□□ 1.16
VDR-204ENST00000547065 BLOC1S2Q6QNY1 142 aa22.31■■□□□ 1.16
VDR-204ENST00000547065 XAGE2Q96GT9 111 aa22.31■■□□□ 1.16
VDR-204ENST00000547065 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.31■■□□□ 1.16
VDR-204ENST00000547065 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
VDR-204ENST00000547065 CRKLP46109 303 aaKnown RBP22.3■■□□□ 1.16
VDR-204ENST00000547065 LRRFIP1Q32MZ4 808 aaKnown RBP22.3■■□□□ 1.16
VDR-204ENST00000547065 TTC39AQ5SRH9 613 aa22.3■■□□□ 1.16
VDR-204ENST00000547065 GREM2Q9H772 168 aa22.3■■□□□ 1.16
VDR-204ENST00000547065 ZMYM1Q5SVZ6 1142 aa22.3■■□□□ 1.16
VDR-204ENST00000547065 LDHAL6AQ6ZMR3 332 aa22.3■■□□□ 1.16
VDR-204ENST00000547065 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
VDR-204ENST00000547065 RNF113AO15541 343 aaKnown RBP22.29■■□□□ 1.16
VDR-204ENST00000547065 RPS6KB1P23443 525 aa22.29■■□□□ 1.16
VDR-204ENST00000547065 METTL24Q5JXM2 366 aa22.29■■□□□ 1.16
VDR-204ENST00000547065 SEC62Q99442 399 aaKnown RBP22.29■■□□□ 1.16
VDR-204ENST00000547065 LARP6Q9BRS8 491 aaKnown RBP22.29■■□□□ 1.16
VDR-204ENST00000547065 CCDC129Q6ZRS4 1044 aa22.28■■□□□ 1.16
VDR-204ENST00000547065 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
VDR-204ENST00000547065 PRPF40AO75400 957 aaKnown RBP22.27■■□□□ 1.16
VDR-204ENST00000547065 ADORA1P30542 326 aa22.27■■□□□ 1.16
VDR-204ENST00000547065 FOXD4L5Q5VV16 416 aaPredicted RBP22.27■■□□□ 1.16
VDR-204ENST00000547065 FOXD4L4Q8WXT5 416 aaPredicted RBP22.27■■□□□ 1.16
VDR-204ENST00000547065 ITPK1Q13572 414 aa22.27■■□□□ 1.16
VDR-204ENST00000547065 ATP2B3Q16720 1220 aa22.27■■□□□ 1.16
VDR-204ENST00000547065 DSCC1Q9BVC3 393 aa22.27■■□□□ 1.16
VDR-204ENST00000547065 CNNM1Q9NRU3 951 aa22.27■■□□□ 1.16
VDR-204ENST00000547065 ANKRD36CQ5JPF3 1778 aa22.26■■□□□ 1.15
VDR-204ENST00000547065 LARGE1O95461 756 aa22.26■■□□□ 1.15
VDR-204ENST00000547065 CHGBP05060 677 aa22.26■■□□□ 1.15
VDR-204ENST00000547065 PARP10Q53GL7 1025 aa22.26■■□□□ 1.15
VDR-204ENST00000547065 ABCC12Q96J65 1359 aa22.26■■□□□ 1.15
VDR-204ENST00000547065 MRE11P49959 708 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 FKBP4Q02790 459 aaKnown RBP eCLIP22.25■■□□□ 1.15
VDR-204ENST00000547065 VPS72Q15906 364 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 ME3Q16798 604 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 CCDC83Q8IWF9 413 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 SPEF2Q9C093 1822 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 NUP98P52948 1817 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 ZFYP08048 801 aaPredicted RBP22.25■■□□□ 1.15
VDR-204ENST00000547065 UTP14AQ9BVJ6 771 aaKnown RBP22.25■■□□□ 1.15
VDR-204ENST00000547065 TPCN1Q9ULQ1 816 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 TAF6LQ9Y6J9 622 aa22.25■■□□□ 1.15
VDR-204ENST00000547065 UBAP1LF5GYI3 381 aa22.24■■□□□ 1.15
VDR-204ENST00000547065 CAMTA2O94983 1202 aa22.24■■□□□ 1.15
VDR-204ENST00000547065 SUSD4Q5VX71 490 aa22.24■■□□□ 1.15
VDR-204ENST00000547065 ZNF512BQ96KM6 892 aaPredicted RBP22.24■■□□□ 1.15
VDR-204ENST00000547065 NEK1Q96PY6 1258 aa22.24■■□□□ 1.15
VDR-204ENST00000547065 XRCC6P12956 609 aaKnown RBP eCLIP22.23■■□□□ 1.15
VDR-204ENST00000547065 HSP90B1P14625 803 aaKnown RBP22.23■■□□□ 1.15
VDR-204ENST00000547065 NGLY1Q96IV0 654 aa22.23■■□□□ 1.15
VDR-204ENST00000547065 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
VDR-204ENST00000547065 STX6O43752 255 aa22.22■■□□□ 1.15
VDR-204ENST00000547065 ZSCAN22P10073 491 aaPredicted RBP22.22■■□□□ 1.15
VDR-204ENST00000547065 PDIA4P13667 645 aaKnown RBP22.22■■□□□ 1.15
VDR-204ENST00000547065 SYT1P21579 422 aa22.22■■□□□ 1.15
VDR-204ENST00000547065 FAM98CQ17RN3 349 aaKnown RBP22.22■■□□□ 1.15
VDR-204ENST00000547065 VGLL2Q8N8G2 317 aa22.22■■□□□ 1.15
VDR-204ENST00000547065 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
VDR-204ENST00000547065 PDE8BO95263 885 aa22.22■■□□□ 1.15
VDR-204ENST00000547065 CYP21A2P08686 494 aa22.22■■□□□ 1.15
VDR-204ENST00000547065 NCLP19338 710 aaKnown RBP22.22■■□□□ 1.15
VDR-204ENST00000547065 KCNQ2O43526 872 aa22.21■■□□□ 1.15
VDR-204ENST00000547065 HMGB1P09429 215 aaKnown RBP22.21■■□□□ 1.15
VDR-204ENST00000547065 GJB2P29033 226 aa22.21■■□□□ 1.15
VDR-204ENST00000547065 TOB2Q14106 344 aaPredicted RBP22.21■■□□□ 1.15
VDR-204ENST00000547065 MROH5Q6ZUA9 1318 aa22.21■■□□□ 1.15
VDR-204ENST00000547065 CICQ96RK0 1608 aaPredicted RBP22.21■■□□□ 1.15
VDR-204ENST00000547065 C8orf37Q96NL8 207 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 MAST3O60307 1309 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 RREB1Q92766 1687 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 MBD3O95983 291 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 HSPD1P10809 573 aaKnown RBP22.2■■□□□ 1.14
VDR-204ENST00000547065 ZAP70P43403 619 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 ST3GAL1Q11201 340 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 SLFNL1Q499Z3 407 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 NECAB1Q8N987 351 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 GRPEL1Q9HAV7 217 aa22.2■■□□□ 1.14
VDR-204ENST00000547065 HCLS1P14317 486 aaPredicted RBP22.19■■□□□ 1.14
VDR-204ENST00000547065 COL9A3Q14050 684 aaPredicted RBP22.19■■□□□ 1.14
VDR-204ENST00000547065 SCARF1Q14162 830 aa22.19■■□□□ 1.14
VDR-204ENST00000547065 GPT2Q8TD30 523 aa22.19■■□□□ 1.14
VDR-204ENST00000547065 CHAMP1Q96JM3 812 aa22.19■■□□□ 1.14
VDR-204ENST00000547065 ZNF652Q9Y2D9 606 aa22.19■■□□□ 1.14
VDR-204ENST00000547065 ATP6V1DQ9Y5K8 247 aa22.19■■□□□ 1.14
VDR-204ENST00000547065 OSBP2Q969R2 916 aa22.18■■□□□ 1.14
VDR-204ENST00000547065 BCL9LQ86UU0 1499 aa22.18■■□□□ 1.14
VDR-204ENST00000547065 M0R2C6 588 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 ZNF445P59923 1031 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 ZSCAN25Q6NSZ9 544 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 CAVIN1Q6NZI2 390 aaKnown RBP22.17■■□□□ 1.14
VDR-204ENST00000547065 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 FNBP4Q8N3X1 1017 aaPredicted RBP22.17■■□□□ 1.14
VDR-204ENST00000547065 TCEANC2Q96MN5 208 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 NIP7Q9Y221 180 aaKnown RBP eCLIP22.17■■□□□ 1.14
VDR-204ENST00000547065 UQCRFS1P1P0C7P4 283 aa22.17■■□□□ 1.14
VDR-204ENST00000547065 TTF1Q15361 905 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms