RNA–Protein interactions for RNA: ENST00000546761.5

PRIM1-202, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-202ENST00000546761 HOXA2O43364 376 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 NEFLP07196 543 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 JUNDP17535 347 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 GUCA2AQ02747 115 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 DCTN1Q14203 1278 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 DDB1Q16531 1140 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 ZNF772Q68DY9 489 aaPredicted RBP6.48□□□□□ -1.37
PRIM1-202ENST00000546761 MPRIPQ6WCQ1 1025 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 MBIPQ9NS73 344 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 TSPYL4Q9UJ04 414 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 RCAN3Q9UKA8 241 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 LAMB4A4D0S4 1761 aa6.48□□□□□ -1.37
PRIM1-202ENST00000546761 KDM6AO15550 1401 aaPredicted RBP6.48□□□□□ -1.37
PRIM1-202ENST00000546761 BTBD11A6QL63 1104 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 IRF6O14896 467 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 CYP27B1O15528 508 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 WIPF1O43516 503 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 SKOR1P84550 965 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 EXOSC9Q06265 439 aaKnown RBP6.47□□□□□ -1.37
PRIM1-202ENST00000546761 ALDH1L2Q3SY69 923 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 SYMPKQ92797 1274 aaKnown RBP6.47□□□□□ -1.37
PRIM1-202ENST00000546761 TSR2Q969E8 191 aaKnown RBP6.47□□□□□ -1.37
PRIM1-202ENST00000546761 DDRGK1Q96HY6 314 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 NUDT12Q9BQG2 462 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 THUMPD2Q9BTF0 503 aaKnown RBP6.47□□□□□ -1.37
PRIM1-202ENST00000546761 SLC52A2Q9HAB3 445 aa6.47□□□□□ -1.37
PRIM1-202ENST00000546761 FAM181BA6NEQ2 426 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 C6orf229H3BNL8 230 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 HOXB7P09629 217 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 MS4A1P11836 297 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 CABP4P57796 275 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 TWISTNBQ3B726 338 aaPredicted RBP6.46□□□□□ -1.38
PRIM1-202ENST00000546761 TTC5Q8N0Z6 440 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
PRIM1-202ENST00000546761 GJD4Q96KN9 370 aaPredicted RBP6.46□□□□□ -1.38
PRIM1-202ENST00000546761 LGR6Q9HBX8 967 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 RNF123Q5XPI4 1314 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 SBF2Q86WG5 1849 aa6.46□□□□□ -1.38
PRIM1-202ENST00000546761 ZNF831Q5JPB2 1677 aa6.45□□□□□ -1.38
PRIM1-202ENST00000546761 NHSQ6T4R5 1651 aa6.45□□□□□ -1.38
PRIM1-202ENST00000546761 CAPN5O15484 640 aaPredicted RBP6.45□□□□□ -1.38
PRIM1-202ENST00000546761 IGSF3O75054 1194 aa6.45□□□□□ -1.38
PRIM1-202ENST00000546761 ERICH6BQ5W0A0 696 aa6.45□□□□□ -1.38
PRIM1-202ENST00000546761 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
PRIM1-202ENST00000546761 CICQ96RK0 1608 aaPredicted RBP6.45□□□□□ -1.38
PRIM1-202ENST00000546761 KIF16BQ96L93 1317 aa6.45□□□□□ -1.38
PRIM1-202ENST00000546761 KAT6BQ8WYB5 2073 aa6.45□□□□□ -1.38
PRIM1-202ENST00000546761 BCL9O00512 1426 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 BRWD3Q6RI45 1802 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 VAMP4O75379 141 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 BMP1P13497 986 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 CANXP27824 592 aaKnown RBP6.44□□□□□ -1.38
PRIM1-202ENST00000546761 CLCN1P35523 988 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
PRIM1-202ENST00000546761 RRP1P56182 461 aaKnown RBP6.44□□□□□ -1.38
PRIM1-202ENST00000546761 RBM6P78332 1123 aaKnown RBP6.44□□□□□ -1.38
PRIM1-202ENST00000546761 ZNF790Q6PG37 636 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 NFATC2IPQ8NCF5 419 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 QTRT2Q9H974 415 aaKnown RBP6.44□□□□□ -1.38
PRIM1-202ENST00000546761 GPCPD1Q9NPB8 672 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 TMOD3Q9NYL9 352 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 C5P01031 1676 aa6.44□□□□□ -1.38
PRIM1-202ENST00000546761 N4BP2Q86UW6 1770 aaPredicted RBP6.44□□□□□ -1.38
PRIM1-202ENST00000546761 IPO8O15397 1037 aaKnown RBP6.43□□□□□ -1.38
PRIM1-202ENST00000546761 EIF4A1P60842 406 aaKnown RBP6.43□□□□□ -1.38
PRIM1-202ENST00000546761 CCDC30Q5VVM6 783 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 RETREG3Q86VR2 466 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 CCDC102AQ96A19 550 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 FMNL2Q96PY5 1086 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 STK31Q9BXU1 1019 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 SMC4Q9NTJ3 1288 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
PRIM1-202ENST00000546761 BTAF1O14981 1849 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 HEG1Q9ULI3 1381 aa6.43□□□□□ -1.38
PRIM1-202ENST00000546761 KCPQ6ZWJ8 1503 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 FDX1P10109 184 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 HMGB2P26583 209 aaKnown RBP6.42□□□□□ -1.38
PRIM1-202ENST00000546761 VEGFBP49765 207 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 PDE3AQ14432 1141 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 ZKSCAN2Q63HK3 967 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 PTCRAQ6ISU1 281 aaPredicted RBP6.42□□□□□ -1.38
PRIM1-202ENST00000546761 MARCH10Q8NA82 808 aaPredicted RBP6.42□□□□□ -1.38
PRIM1-202ENST00000546761 C8orf58Q8NAV2 365 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 SSH1Q8WYL5 1049 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 ARHGAP45Q92619 1136 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 TEX13AQ9BXU3 409 aaPredicted RBP6.42□□□□□ -1.38
PRIM1-202ENST00000546761 MIS18AQ9NYP9 233 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 LY75O60449 1722 aa6.42□□□□□ -1.38
PRIM1-202ENST00000546761 ELL2O00472 640 aaPredicted RBP6.41□□□□□ -1.38
PRIM1-202ENST00000546761 BCAR3O75815 825 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 SNRPA1P09661 255 aaKnown RBP6.41□□□□□ -1.38
PRIM1-202ENST00000546761 CCNYL3P0C7X3 344 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 AAMPQ13685 434 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 LINC01559Q495D7 138 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 HDGFL1Q5TGJ6 251 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 TMCO4Q5TGY1 634 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 SEPT12Q8IYM1 358 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms