RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 LARGE1O95461 756 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 CCDC183Q5T5S1 534 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 PI4KAP1Q8N8J0 262 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 ERO1AQ96HE7 468 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 CALR3Q96L12 384 aaKnown RBP9.22□□□□□ -0.93
UBR1-202ENST00000546274 PLCD4Q9BRC7 762 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
UBR1-202ENST00000546274 HOXB7P09629 217 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.93
UBR1-202ENST00000546274 OS9Q13438 667 aaPredicted RBP9.21□□□□□ -0.93
UBR1-202ENST00000546274 RPAINQ86UA6 219 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 DNAAF4Q8WXU2 420 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 LARP6Q9BRS8 491 aaKnown RBP9.21□□□□□ -0.93
UBR1-202ENST00000546274 CNPY2Q9Y2B0 182 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.21□□□□□ -0.93
UBR1-202ENST00000546274 CPA1P15085 419 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 MTX1Q13505 466 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 PTPN14Q15678 1187 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 CEP120Q8N960 986 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 FBXO18Q8NFZ0 1043 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 SYTL4Q96C24 671 aaPredicted RBP9.21□□□□□ -0.93
UBR1-202ENST00000546274 CCDC34Q96HJ3 373 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 SPG7Q9UQ90 795 aa9.21□□□□□ -0.93
UBR1-202ENST00000546274 C5P01031 1676 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 NCAPD2Q15021 1401 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 USP27XA6NNY8 438 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 SLU7O95391 586 aaKnown RBP9.21□□□□□ -0.94
UBR1-202ENST00000546274 ANXA1P04083 346 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 SKIDA1Q1XH10 827 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
UBR1-202ENST00000546274 CNTROBQ8N137 903 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 MNS1Q8NEH6 495 aa9.21□□□□□ -0.94
UBR1-202ENST00000546274 ZSCAN22P10073 491 aaPredicted RBP9.2□□□□□ -0.94
UBR1-202ENST00000546274 ATF3P18847 181 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 SYT1P21579 422 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 OAS2P29728 719 aaKnown RBP9.2□□□□□ -0.94
UBR1-202ENST00000546274 MAGEA9P43362 315 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 ST3GAL1Q11201 340 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 GORABQ5T7V8 394 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 IP6K1Q92551 441 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 HYPKQ9NX55 129 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 TTC41PQ6P2S7 1318 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 RGPD5Q99666 1765 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 CCDC189A1A4V9 331 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 KIF1CO43896 1103 aaKnown RBP9.2□□□□□ -0.94
UBR1-202ENST00000546274 SEC31AO94979 1220 aaKnown RBP9.2□□□□□ -0.94
UBR1-202ENST00000546274 PTH1RQ03431 593 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 ADCK5Q3MIX3 580 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 ARHGAP29Q52LW3 1261 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 TMCO3Q6UWJ1 677 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 KCNB2Q92953 911 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 LIMCH1Q9UPQ0 1083 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 CCDC9Q9Y3X0 531 aaKnown RBP9.2□□□□□ -0.94
UBR1-202ENST00000546274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
UBR1-202ENST00000546274 HEG1Q9ULI3 1381 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 MCTP2Q6DN12 878 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 ZSCAN25Q6NSZ9 544 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 GOLGA5Q8TBA6 731 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 AK7Q96M32 723 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 TRIM5Q9C035 493 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
UBR1-202ENST00000546274 EIF3CLB5ME19 914 aaKnown RBP9.19□□□□□ -0.94
UBR1-202ENST00000546274 STX6O43752 255 aa9.19□□□□□ -0.94
UBR1-202ENST00000546274 LRRN4CLQ8ND94 238 aa9.19□□□□□ -0.94
UBR1-202ENST00000546274 EIF3CQ99613 913 aaKnown RBP9.19□□□□□ -0.94
UBR1-202ENST00000546274 DTNBO60941 627 aa9.19□□□□□ -0.94
UBR1-202ENST00000546274 F13A1P00488 732 aa9.19□□□□□ -0.94
UBR1-202ENST00000546274 MNAT1P51948 309 aa9.19□□□□□ -0.94
UBR1-202ENST00000546274 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
UBR1-202ENST00000546274 PDRG1Q9NUG6 133 aa9.19□□□□□ -0.94
UBR1-202ENST00000546274 CASTP20810 708 aaKnown RBP9.18□□□□□ -0.94
UBR1-202ENST00000546274 PROSER3Q2NL68 480 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 FOXR1Q6PIV2 292 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 LEKR1Q6ZMV7 388 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 LUZP1Q86V48 1076 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 TICAM2Q86XR7 235 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 CACTINQ8WUQ7 758 aaKnown RBP9.18□□□□□ -0.94
UBR1-202ENST00000546274 FUCA2Q9BTY2 467 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 GLRX3O76003 335 aaKnown RBP9.18□□□□□ -0.94
UBR1-202ENST00000546274 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 AHDC1Q5TGY3 1603 aaPredicted RBP9.18□□□□□ -0.94
UBR1-202ENST00000546274 OVOS2A0A0G2JMS6 1433 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 SCP2P22307 547 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 LRRC59Q96AG4 307 aaKnown RBP9.18□□□□□ -0.94
UBR1-202ENST00000546274 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 SLIT3O75094 1523 aa9.18□□□□□ -0.94
UBR1-202ENST00000546274 MRC1P22897 1456 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 PRAMEF22A3QJZ6 481 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 FIBPO43427 364 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
UBR1-202ENST00000546274 GSCP56915 257 aaPredicted RBP9.17□□□□□ -0.94
UBR1-202ENST00000546274 UBE2HP62256 183 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms