RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 ABCB6Q9NP58 842 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
SOD2-216ENST00000546260 FANCCQ00597 558 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 GNAI3P08754 354 aa11.88□□□□□ -0.51
SOD2-216ENST00000546260 HSPA4P34932 840 aa11.88□□□□□ -0.51
SOD2-216ENST00000546260 RBBP5Q15291 538 aaKnown RBP11.88□□□□□ -0.51
SOD2-216ENST00000546260 PSD3Q9NYI0 1048 aa11.88□□□□□ -0.51
SOD2-216ENST00000546260 FKBP15Q5T1M5 1219 aa11.88□□□□□ -0.51
SOD2-216ENST00000546260 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
SOD2-216ENST00000546260 CTAGE9A4FU28 777 aa11.88□□□□□ -0.51
SOD2-216ENST00000546260 B4GALNT4Q76KP1 1039 aa11.88□□□□□ -0.51
SOD2-216ENST00000546260 CASP8Q14790 479 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 CCDC121Q6ZUS5 278 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 PPP2R2CQ9Y2T4 447 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 A0A1B0GVL5 298 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 LARGE1O95461 756 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 CCDC175P0C221 793 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 TRDNQ13061 729 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 STIM1Q13586 685 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
SOD2-216ENST00000546260 L2HGDHQ9H9P8 463 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 PAX7P23759 505 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 DYDC1Q8WWB3 177 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 ZRANB2O95218 330 aaKnown RBP eCLIP11.87□□□□□ -0.51
SOD2-216ENST00000546260 NFE2L2Q16236 605 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 ODF2Q5BJF6 829 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 CAPZA3Q96KX2 299 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
SOD2-216ENST00000546260 CHUKO15111 745 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 MCM3P25205 808 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 HINFPQ9BQA5 517 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 CPLX1O14810 134 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
SOD2-216ENST00000546260 FUT8Q9BYC5 575 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
SOD2-216ENST00000546260 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
SOD2-216ENST00000546260 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 MTX1Q13505 466 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 ME3Q16798 604 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
SOD2-216ENST00000546260 CAPS2Q9BXY5 557 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 ARHGAP25P42331 645 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
SOD2-216ENST00000546260 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
SOD2-216ENST00000546260 REXO1L1PQ8IX06 675 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 FCHSD2O94868 740 aa11.85□□□□□ -0.51
SOD2-216ENST00000546260 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
SOD2-216ENST00000546260 ADKP55263 362 aaKnown RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 PIP4K2BP78356 416 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 SRGAP1Q7Z6B7 1085 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 TBC1D31Q96DN5 1066 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 NUCKS1Q9H1E3 243 aaKnown RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 BAIAP2L1Q9UHR4 511 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 BUB1BO60566 1050 aaPredicted RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 SCRN1Q12765 414 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 PCMTD1Q96MG8 357 aaPredicted RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 AKAP2Q9Y2D5 859 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 SCAF11Q99590 1463 aaKnown RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 MYO1FO00160 1098 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 SKAP2O75563 359 aaPredicted RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 IRX1P78414 480 aaPredicted RBP11.84□□□□□ -0.51
SOD2-216ENST00000546260 FAM160A1Q05DH4 1040 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 PSMD2Q13200 908 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 VPS53Q5VIR6 699 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 KLHL10Q6JEL2 608 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 ARMC2Q8NEN0 867 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 LRRC2Q9BYS8 371 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 MIS18AQ9NYP9 233 aa11.84□□□□□ -0.51
SOD2-216ENST00000546260 WDR7Q9Y4E6 1490 aa11.83□□□□□ -0.51
SOD2-216ENST00000546260 GOLGA6BA6NDN3 693 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 GGT6Q6P531 493 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 RPGRIP1LQ68CZ1 1315 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
SOD2-216ENST00000546260 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
SOD2-216ENST00000546260 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 ENO4A6NNW6 628 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 ERCC3P19447 782 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 ARMCX5Q6P1M9 558 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms