RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SERPINB2P05120 415 aa23.67■■□□□ 1.38
SKP2-208ENST00000546211 ST5P78524 1137 aa23.67■■□□□ 1.38
SKP2-208ENST00000546211 ATP2B3Q16720 1220 aa23.67■■□□□ 1.38
SKP2-208ENST00000546211 NLGN1Q8N2Q7 840 aa23.67■■□□□ 1.38
SKP2-208ENST00000546211 CCDC24Q8N4L8 307 aa23.67■■□□□ 1.38
SKP2-208ENST00000546211 EVI5LQ96CN4 794 aa23.67■■□□□ 1.38
SKP2-208ENST00000546211 PDE8BO95263 885 aa23.66■■□□□ 1.38
SKP2-208ENST00000546211 CHMLP26374 656 aa23.66■■□□□ 1.38
SKP2-208ENST00000546211 VGLL2Q8N8G2 317 aa23.66■■□□□ 1.38
SKP2-208ENST00000546211 TBC1D32Q96NH3 1257 aa23.66■■□□□ 1.38
SKP2-208ENST00000546211 C22orf23Q9BZE7 217 aa23.66■■□□□ 1.38
SKP2-208ENST00000546211 PNPLA7Q6ZV29 1317 aa23.66■■□□□ 1.38
SKP2-208ENST00000546211 GORABQ5T7V8 394 aa23.65■■□□□ 1.38
SKP2-208ENST00000546211 PRR5LQ6MZQ0 368 aa23.65■■□□□ 1.38
SKP2-208ENST00000546211 STK32BQ9NY57 414 aa23.65■■□□□ 1.38
SKP2-208ENST00000546211 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
SKP2-208ENST00000546211 CCDC158Q5M9N0 1113 aa23.65■■□□□ 1.38
SKP2-208ENST00000546211 AK9Q5TCS8 1911 aa23.64■■□□□ 1.37
SKP2-208ENST00000546211 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
SKP2-208ENST00000546211 SLC15A2Q16348 729 aa23.64■■□□□ 1.37
SKP2-208ENST00000546211 XAGE2Q96GT9 111 aa23.64■■□□□ 1.37
SKP2-208ENST00000546211 DDR1Q08345 913 aa23.63■■□□□ 1.37
SKP2-208ENST00000546211 PUM3Q15397 648 aaKnown RBP23.63■■□□□ 1.37
SKP2-208ENST00000546211 DDX46Q7L014 1031 aaKnown RBP23.63■■□□□ 1.37
SKP2-208ENST00000546211 REC8O95072 547 aa23.62■■□□□ 1.37
SKP2-208ENST00000546211 HAUS7Q99871 368 aa23.62■■□□□ 1.37
SKP2-208ENST00000546211 ESYT1Q9BSJ8 1104 aa23.62■■□□□ 1.37
SKP2-208ENST00000546211 BSDC1Q9NW68 430 aaPredicted RBP23.62■■□□□ 1.37
SKP2-208ENST00000546211 SPEF2Q9C093 1822 aa23.62■■□□□ 1.37
SKP2-208ENST00000546211 TTC39AQ5SRH9 613 aa23.61■■□□□ 1.37
SKP2-208ENST00000546211 HELBQ8NG08 1087 aaPredicted RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.61■■□□□ 1.37
SKP2-208ENST00000546211 LPIN2Q92539 896 aa23.61■■□□□ 1.37
SKP2-208ENST00000546211 ANO8Q9HCE9 1232 aaPredicted RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 TNRC6CQ9HCJ0 1690 aaKnown RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 HIP1O00291 1037 aa23.61■■□□□ 1.37
SKP2-208ENST00000546211 IFIT1P09914 478 aaKnown RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 ADORA1P30542 326 aa23.61■■□□□ 1.37
SKP2-208ENST00000546211 ILDR1Q86SU0 546 aaPredicted RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 CELF1Q92879 486 aaKnown RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 DNAJC2Q99543 621 aaKnown RBP23.61■■□□□ 1.37
SKP2-208ENST00000546211 SLC5A1P13866 664 aa23.6■■□□□ 1.37
SKP2-208ENST00000546211 RPS8P62241 208 aaKnown RBP23.6■■□□□ 1.37
SKP2-208ENST00000546211 CHRNDQ07001 517 aa23.6■■□□□ 1.37
SKP2-208ENST00000546211 DDRGK1Q96HY6 314 aa23.6■■□□□ 1.37
SKP2-208ENST00000546211 DIAPH3Q9NSV4 1193 aa23.6■■□□□ 1.37
SKP2-208ENST00000546211 FGFR2P21802 821 aa23.59■■□□□ 1.37
SKP2-208ENST00000546211 DEFB132Q7Z7B7 95 aa23.59■■□□□ 1.37
SKP2-208ENST00000546211 FSD1Q9BTV5 496 aa23.59■■□□□ 1.37
SKP2-208ENST00000546211 COL4A1P02462 1669 aa23.58■■□□□ 1.37
SKP2-208ENST00000546211 TAF5LO75529 589 aa23.58■■□□□ 1.37
SKP2-208ENST00000546211 RBM25P49756 843 aaKnown RBP23.58■■□□□ 1.37
SKP2-208ENST00000546211 CCDC125Q86Z20 511 aa23.58■■□□□ 1.37
SKP2-208ENST00000546211 RUFY2Q8WXA3 655 aa23.58■■□□□ 1.37
SKP2-208ENST00000546211 RPGRQ92834 1020 aaKnown RBP23.57■■□□□ 1.36
SKP2-208ENST00000546211 IPO9Q96P70 1041 aaKnown RBP23.57■■□□□ 1.36
SKP2-208ENST00000546211 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
SKP2-208ENST00000546211 PARP3Q9Y6F1 533 aa23.57■■□□□ 1.36
SKP2-208ENST00000546211 MINPP1Q9UNW1 487 aa23.56■■□□□ 1.36
SKP2-208ENST00000546211 QSER1Q2KHR3 1735 aa23.56■■□□□ 1.36
SKP2-208ENST00000546211 ARAP2Q8WZ64 1704 aa23.55■■□□□ 1.36
SKP2-208ENST00000546211 MMP10P09238 476 aa23.55■■□□□ 1.36
SKP2-208ENST00000546211 GRAPQ13588 217 aa23.55■■□□□ 1.36
SKP2-208ENST00000546211 CRY2Q49AN0 593 aa23.55■■□□□ 1.36
SKP2-208ENST00000546211 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
SKP2-208ENST00000546211 EDC3Q96F86 508 aaKnown RBP23.55■■□□□ 1.36
SKP2-208ENST00000546211 ZNF512BQ96KM6 892 aaPredicted RBP23.55■■□□□ 1.36
SKP2-208ENST00000546211 USP26Q9BXU7 913 aa23.55■■□□□ 1.36
SKP2-208ENST00000546211 RFX7Q2KHR2 1363 aa23.55■■□□□ 1.36
SKP2-208ENST00000546211 CWC27Q6UX04 472 aaKnown RBP23.54■■□□□ 1.36
SKP2-208ENST00000546211 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
SKP2-208ENST00000546211 NDUFB9Q9Y6M9 179 aa23.54■■□□□ 1.36
SKP2-208ENST00000546211 TAF1P21675 1872 aa23.54■■□□□ 1.36
SKP2-208ENST00000546211 GOLIM4O00461 696 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 SGSM2O43147 1006 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 UQCRFS1P1P0C7P4 283 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 MSL1Q68DK7 614 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 ANKRD2Q9GZV1 360 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 ANO2Q9NQ90 1003 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 NRXN2Q9P2S2 1712 aa23.53■■□□□ 1.36
SKP2-208ENST00000546211 UBE4AQ14139 1066 aa23.52■■□□□ 1.36
SKP2-208ENST00000546211 CCDC102BQ68D86 513 aa23.52■■□□□ 1.36
SKP2-208ENST00000546211 TICAM2Q86XR7 235 aa23.52■■□□□ 1.36
SKP2-208ENST00000546211 KBTBD3Q8NAB2 608 aa23.52■■□□□ 1.36
SKP2-208ENST00000546211 BRIP1Q9BX63 1249 aa23.52■■□□□ 1.36
SKP2-208ENST00000546211 FKBP4Q02790 459 aaKnown RBP eCLIP23.52■■□□□ 1.36
SKP2-208ENST00000546211 RAD50Q92878 1312 aa23.51■■□□□ 1.35
SKP2-208ENST00000546211 KLRG2A4D1S0 409 aaPredicted RBP23.51■■□□□ 1.35
SKP2-208ENST00000546211 EPB41L2O43491 1005 aaKnown RBP23.51■■□□□ 1.35
SKP2-208ENST00000546211 ARID4AP29374 1257 aaPredicted RBP23.51■■□□□ 1.35
SKP2-208ENST00000546211 A0A1B0GUL6 1792 aa23.5■■□□□ 1.35
SKP2-208ENST00000546211 SNAP23O00161 211 aa23.5■■□□□ 1.35
SKP2-208ENST00000546211 PHKA1P46020 1223 aa23.5■■□□□ 1.35
SKP2-208ENST00000546211 NMIQ13287 307 aaPredicted RBP23.5■■□□□ 1.35
SKP2-208ENST00000546211 KIAA1211Q6ZU35 1233 aa23.5■■□□□ 1.35
SKP2-208ENST00000546211 HOXA10P31260 410 aaPredicted RBP23.49■■□□□ 1.35
SKP2-208ENST00000546211 KCNJ4P48050 445 aa23.49■■□□□ 1.35
SKP2-208ENST00000546211 SCARF1Q14162 830 aa23.49■■□□□ 1.35
SKP2-208ENST00000546211 LRRFIP1Q32MZ4 808 aaKnown RBP23.49■■□□□ 1.35
SKP2-208ENST00000546211 IL25Q9H293 177 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms