RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 SCRN1Q12765 414 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 NAA16Q6N069 864 aaPredicted RBP16.61■□□□□ 0.25
SRP54-202ENST00000546080 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
SRP54-202ENST00000546080 IMPACTQ9P2X3 320 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 NPHP1O15259 732 aa16.6■□□□□ 0.25
SRP54-202ENST00000546080 BMS1Q14692 1282 aaKnown RBP16.6■□□□□ 0.25
SRP54-202ENST00000546080 CREBRFQ8IUR6 639 aa16.6■□□□□ 0.25
SRP54-202ENST00000546080 ZNF396Q96N95 335 aaPredicted RBP16.6■□□□□ 0.25
SRP54-202ENST00000546080 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
SRP54-202ENST00000546080 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
SRP54-202ENST00000546080 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
SRP54-202ENST00000546080 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
SRP54-202ENST00000546080 SLIT1O75093 1534 aa16.6■□□□□ 0.25
SRP54-202ENST00000546080 DIP2AQ14689 1571 aa16.6■□□□□ 0.25
SRP54-202ENST00000546080 RGPD8O14715 1765 aaPredicted RBP16.59■□□□□ 0.25
SRP54-202ENST00000546080 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 ATL3Q6DD88 541 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 CCDC150Q8NCX0 1101 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
SRP54-202ENST00000546080 SLC26A8Q96RN1 970 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 USP28Q96RU2 1077 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 ST7Q9NRC1 585 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 ZNF446Q9NWS9 450 aa16.59■□□□□ 0.25
SRP54-202ENST00000546080 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
SRP54-202ENST00000546080 ERICH4A6NGS2 130 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 ME1P48163 572 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 PROSER3Q2NL68 480 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 NBPF11Q86T75 865 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 NSUN7Q8NE18 718 aaKnown RBP16.58■□□□□ 0.25
SRP54-202ENST00000546080 LINS1Q8NG48 757 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 KAZALD1Q96I82 304 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 PPP1R13BQ96KQ4 1090 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 TIGD1Q96MW7 591 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 LRRC2Q9BYS8 371 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 L2HGDHQ9H9P8 463 aa16.58■□□□□ 0.25
SRP54-202ENST00000546080 COL15A1P39059 1388 aa16.58■□□□□ 0.24
SRP54-202ENST00000546080 NRDCO43847 1150 aa16.58■□□□□ 0.24
SRP54-202ENST00000546080 PFKFB2O60825 505 aa16.58■□□□□ 0.24
SRP54-202ENST00000546080 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
SRP54-202ENST00000546080 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.24
SRP54-202ENST00000546080 E4F1Q66K89 784 aaPredicted RBP16.58■□□□□ 0.24
SRP54-202ENST00000546080 CALCOCO1Q9P1Z2 691 aa16.58■□□□□ 0.24
SRP54-202ENST00000546080 MARF1Q9Y4F3 1742 aaKnown RBP16.58■□□□□ 0.24
SRP54-202ENST00000546080 UTYO14607 1347 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 PTPDC1A2A3K4 754 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 PSDA5PKW4 1024 aaPredicted RBP16.57■□□□□ 0.24
SRP54-202ENST00000546080 SMC2O95347 1197 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
SRP54-202ENST00000546080 SYT10Q6XYQ8 523 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 ABTB2Q8N961 1025 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
SRP54-202ENST00000546080 NOL10Q9BSC4 688 aaKnown RBP16.57■□□□□ 0.24
SRP54-202ENST00000546080 TMEM51Q9NW97 253 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 AMOTL2Q9Y2J4 779 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 CYP21A2P08686 494 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 LTKP29376 864 aa16.57■□□□□ 0.24
SRP54-202ENST00000546080 SFPQP23246 707 aaKnown RBP eCLIP16.56■□□□□ 0.24
SRP54-202ENST00000546080 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
SRP54-202ENST00000546080 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
SRP54-202ENST00000546080 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
SRP54-202ENST00000546080 MRPS27Q92552 414 aaKnown RBP16.56■□□□□ 0.24
SRP54-202ENST00000546080 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
SRP54-202ENST00000546080 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
SRP54-202ENST00000546080 MRC1P22897 1456 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 DDX58O95786 925 aaKnown RBP16.55■□□□□ 0.24
SRP54-202ENST00000546080 TUBB4AP04350 444 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 DHX8Q14562 1220 aaKnown RBP16.55■□□□□ 0.24
SRP54-202ENST00000546080 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
SRP54-202ENST00000546080 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
SRP54-202ENST00000546080 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
SRP54-202ENST00000546080 CLCN6P51797 869 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 MPRIPQ6WCQ1 1025 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 XPO4Q9C0E2 1151 aaKnown RBP16.55■□□□□ 0.24
SRP54-202ENST00000546080 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.243e-7■■■□□ 16.5
SRP54-202ENST00000546080 ZNF609O15014 1411 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 RFX7Q2KHR2 1363 aa16.55■□□□□ 0.24
SRP54-202ENST00000546080 ZBTB22O15209 634 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 CTDNEP1O95476 244 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 ATP5JP18859 108 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 KCNJ6P48051 423 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 TPM4P67936 248 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 CCDC93Q567U6 631 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 ARMCX5Q6P1M9 558 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 FMR1NBQ8N0W7 255 aaPredicted RBP16.54■□□□□ 0.24
SRP54-202ENST00000546080 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 LMO7Q8WWI1 1683 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 GUCY1B3Q02153 619 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 APOBRQ0VD83 1088 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 AIMP1Q12904 312 aaKnown RBP16.54■□□□□ 0.24
SRP54-202ENST00000546080 MCMDC2Q4G0Z9 681 aa16.54■□□□□ 0.24
SRP54-202ENST00000546080 LRRN4CLQ8ND94 238 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms