RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 RTFDC1Q9BY42 306 aaPredicted RBP21.81■■□□□ 1.08
CD9-211ENST00000546073 LAMB2P55268 1798 aa21.81■■□□□ 1.08
CD9-211ENST00000546073 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
CD9-211ENST00000546073 PODXL2Q9NZ53 605 aa21.8■■□□□ 1.08
CD9-211ENST00000546073 MINPP1Q9UNW1 487 aa21.8■■□□□ 1.08
CD9-211ENST00000546073 LEMD3Q9Y2U8 911 aa21.8■■□□□ 1.08
CD9-211ENST00000546073 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
CD9-211ENST00000546073 PLIN1O60240 522 aa21.78■■□□□ 1.08
CD9-211ENST00000546073 AOC3Q16853 763 aa21.78■■□□□ 1.08
CD9-211ENST00000546073 TBC1D16Q8TBP0 767 aa21.78■■□□□ 1.08
CD9-211ENST00000546073 ZNF526Q8TF50 670 aaPredicted RBP21.78■■□□□ 1.08
CD9-211ENST00000546073 TNNQ9UQP3 1299 aa21.78■■□□□ 1.08
CD9-211ENST00000546073 MROH5Q6ZUA9 1318 aa21.78■■□□□ 1.08
CD9-211ENST00000546073 RIMBP2O15034 1052 aa21.77■■□□□ 1.08
CD9-211ENST00000546073 KIAA2012Q0VF49 1180 aa21.77■■□□□ 1.08
CD9-211ENST00000546073 MVPQ14764 893 aaKnown RBP21.77■■□□□ 1.08
CD9-211ENST00000546073 SRGAP3O43295 1099 aa21.76■■□□□ 1.07
CD9-211ENST00000546073 CHRNDQ07001 517 aa21.76■■□□□ 1.07
CD9-211ENST00000546073 CACNA1SQ13698 1873 aa21.76■■□□□ 1.07
CD9-211ENST00000546073 ANKRD44Q8N8A2 993 aa21.76■■□□□ 1.07
CD9-211ENST00000546073 KAZALD1Q96I82 304 aa21.76■■□□□ 1.07
CD9-211ENST00000546073 ZNF594Q96JF6 807 aaPredicted RBP21.76■■□□□ 1.07
CD9-211ENST00000546073 FBXO3Q9UK99 471 aa21.76■■□□□ 1.07
CD9-211ENST00000546073 CHD4Q14839 1912 aa21.75■■□□□ 1.07
CD9-211ENST00000546073 TNIP1Q15025 636 aa21.75■■□□□ 1.07
CD9-211ENST00000546073 METTL24Q5JXM2 366 aa21.75■■□□□ 1.07
CD9-211ENST00000546073 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
CD9-211ENST00000546073 ZNRF3Q9ULT6 936 aa21.75■■□□□ 1.07
CD9-211ENST00000546073 COG6Q9Y2V7 657 aa21.75■■□□□ 1.07
CD9-211ENST00000546073 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
CD9-211ENST00000546073 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
CD9-211ENST00000546073 POLLQ9UGP5 575 aa21.74■■□□□ 1.07
CD9-211ENST00000546073 ZNF804BA4D1E1 1349 aa21.74■■□□□ 1.07
CD9-211ENST00000546073 RLBP1P12271 317 aa21.73■■□□□ 1.07
CD9-211ENST00000546073 ZNF784Q8NCA9 323 aaPredicted RBP21.73■■□□□ 1.07
CD9-211ENST00000546073 MYH3P11055 1940 aa21.72■■□□□ 1.07
CD9-211ENST00000546073 G3BP1Q13283 466 aaKnown RBP eCLIP21.72■■□□□ 1.07
CD9-211ENST00000546073 CEP126Q9P2H0 1117 aa21.72■■□□□ 1.07
CD9-211ENST00000546073 GJA3Q9Y6H8 435 aa21.72■■□□□ 1.07
CD9-211ENST00000546073 EYA2O00167 538 aa21.71■■□□□ 1.07
CD9-211ENST00000546073 HMMRO75330 724 aa21.71■■□□□ 1.07
CD9-211ENST00000546073 LMOD1P29536 600 aaPredicted RBP21.71■■□□□ 1.07
CD9-211ENST00000546073 RRP1P56182 461 aaKnown RBP21.71■■□□□ 1.07
CD9-211ENST00000546073 OS9Q13438 667 aaPredicted RBP21.71■■□□□ 1.07
CD9-211ENST00000546073 VPS37DQ86XT2 251 aa21.71■■□□□ 1.07
CD9-211ENST00000546073 IQCA1LA6NCM1 817 aa21.7■■□□□ 1.06
CD9-211ENST00000546073 FZD9O00144 591 aa21.7■■□□□ 1.06
CD9-211ENST00000546073 MTX1Q13505 466 aa21.7■■□□□ 1.06
CD9-211ENST00000546073 ZNF804AQ7Z570 1209 aa21.7■■□□□ 1.06
CD9-211ENST00000546073 HELBQ8NG08 1087 aaPredicted RBP21.7■■□□□ 1.06
CD9-211ENST00000546073 SIL1Q9H173 461 aa21.7■■□□□ 1.06
CD9-211ENST00000546073 FER1L6Q2WGJ9 1857 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 TAF5LO75529 589 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 CIAO1O76071 339 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 IFIT1P09914 478 aaKnown RBP21.69■■□□□ 1.06
CD9-211ENST00000546073 IL15P40933 162 aaPredicted RBP21.69■■□□□ 1.06
CD9-211ENST00000546073 UBE4AQ14139 1066 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 DOK7Q18PE1 504 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 CAVIN4Q5BKX8 364 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 CIAPIN1Q6FI81 312 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 GPC2Q8N158 579 aa21.69■■□□□ 1.06
CD9-211ENST00000546073 ECE2O60344 883 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 VEGFAP15692 232 aaPredicted RBP21.68■■□□□ 1.06
CD9-211ENST00000546073 PRELPP51888 382 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 ATP8B2P98198 1209 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 PTPN12Q05209 780 aaKnown RBP21.68■■□□□ 1.06
CD9-211ENST00000546073 PODNQ7Z5L7 613 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 COA1Q9GZY4 146 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 DBNDD1Q9H9R9 158 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 COPRSQ9NQ92 184 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 RIPOR2Q9Y4F9 1068 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 MED23Q9ULK4 1368 aa21.68■■□□□ 1.06
CD9-211ENST00000546073 GOLGB1Q14789 3259 aaKnown RBP21.68■■□□□ 1.06
CD9-211ENST00000546073 FRAT2O75474 233 aaPredicted RBP21.67■■□□□ 1.06
CD9-211ENST00000546073 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
CD9-211ENST00000546073 KLHDC4Q8TBB5 520 aa21.67■■□□□ 1.06
CD9-211ENST00000546073 PUS3Q9BZE2 481 aaKnown RBP21.67■■□□□ 1.06
CD9-211ENST00000546073 C1orf115Q9H7X2 142 aa21.67■■□□□ 1.06
CD9-211ENST00000546073 AKAP2Q9Y2D5 859 aa21.67■■□□□ 1.06
CD9-211ENST00000546073 SNED1Q8TER0 1413 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 DDNO94850 711 aaPredicted RBP21.66■■□□□ 1.06
CD9-211ENST00000546073 PDE8BO95263 885 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 SLC5A1P13866 664 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 PUM3Q15397 648 aaKnown RBP21.66■■□□□ 1.06
CD9-211ENST00000546073 LRRC24Q50LG9 513 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 FBXW7Q969H0 707 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 RRAGCQ9HB90 399 aa21.66■■□□□ 1.06
CD9-211ENST00000546073 RAD17O75943 681 aa21.65■■□□□ 1.06
CD9-211ENST00000546073 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
CD9-211ENST00000546073 SLC51AQ86UW1 340 aa21.65■■□□□ 1.06
CD9-211ENST00000546073 GPR101Q96P66 508 aaPredicted RBP21.65■■□□□ 1.06
CD9-211ENST00000546073 SURF6O75683 361 aaKnown RBP21.64■■□□□ 1.05
CD9-211ENST00000546073 CXCL9Q07325 125 aa21.63■■□□□ 1.05
CD9-211ENST00000546073 LPIN2Q92539 896 aa21.63■■□□□ 1.05
CD9-211ENST00000546073 GNL3LQ9NVN8 582 aaKnown RBP21.63■■□□□ 1.05
CD9-211ENST00000546073 HACL1Q9UJ83 578 aa21.63■■□□□ 1.05
CD9-211ENST00000546073 PA2G4Q9UQ80 394 aaKnown RBP21.63■■□□□ 1.05
CD9-211ENST00000546073 TAF1P21675 1872 aa21.62■■□□□ 1.05
CD9-211ENST00000546073 USP17L3A6NCW0 530 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms