RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SYT9	Q86SS6	491 aa		7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	NIF3L1	Q9GZT8	377 aa		7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	NOP53	Q9NZM5	478 aa	Known RBP	7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	KLF15	Q9UIH9	416 aa		7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.44	□□□□□ -1.22
RAP1B-231	ENST00000544639	SIN3B	O75182	1162 aa		7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	PCBP4	P57723	403 aa	Known RBP	7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	ORC1	Q13415	861 aa		7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	COL19A1	Q14993	1142 aa		7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	RGS22	Q8NE09	1264 aa		7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	CHRD	Q9H2X0	955 aa		7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	TLR7	Q9NYK1	1049 aa	Known RBP	7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	CNTN3	Q9P232	1028 aa		7.43	□□□□□ -1.22
RAP1B-231	ENST00000544639	SOX18	P35713	384 aa		7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639	BAG6	P46379	1132 aa		7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639	PLCB3	Q01970	1234 aa		7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639	CHSY3	Q70JA7	882 aa		7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639	OR13H1	Q8NG92	308 aa		7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639	SUV39H2	Q9H5I1	410 aa		7.42	□□□□□ -1.22
RAP1B-231	ENST00000544639		K7ELQ4	463 aa	Predicted RBP	7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	PHACTR2	O75167	634 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	NEFL	P07196	543 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	P4HB	P07237	508 aa	Known RBP	7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	HOXD8	P13378	290 aa	Predicted RBP	7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	DHX32	Q7L7V1	743 aa	Known RBP	7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	FCHSD1	Q86WN1	690 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	C1orf127	Q8N9H9	656 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	TNFRSF25	Q93038	417 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	CSRNP1	Q96S65	589 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	MDFI	Q99750	246 aa		7.41	□□□□□ -1.22
RAP1B-231	ENST00000544639	EIF1AY	O14602	144 aa	Known RBP	7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	CYP2E1	P05181	493 aa	Predicted RBP	7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	PSAP	P07602	524 aa		7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	NRL	P54845	237 aa		7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	ENOX2	Q16206	610 aa	Known RBP	7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	DNAJC25	Q9H1X3	360 aa		7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	ZFYVE28	Q9HCC9	887 aa		7.4	□□□□□ -1.22
RAP1B-231	ENST00000544639	ADARB2-AS1	A8MUL3	147 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	EREG	O14944	169 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	CPNE3	O75131	537 aa	Known RBP	7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	MAPK8	P45983	427 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	GPLD1	P80108	840 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	PLAUR	Q03405	335 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	FBXO33	Q7Z6M2	555 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	TRPM4	Q8TD43	1214 aa		7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	UBE2O	Q9C0C9	1292 aa	Known RBP	7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	DNAJB12	Q9NXW2	375 aa	Known RBP	7.39	□□□□□ -1.23
RAP1B-231	ENST00000544639	PNMA6F	A0A0J9YX94	578 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	ZBTB42	B2RXF5	422 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	KIF4A	O95239	1232 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	CES1	P23141	567 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	USPL1	Q5W0Q7	1092 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	PMEPA1	Q969W9	287 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	KANSL3	Q9P2N6	904 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	AMOTL2	Q9Y2J4	779 aa		7.38	□□□□□ -1.23
RAP1B-231	ENST00000544639	ADH7	P40394	386 aa		7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	TBC1D8B	Q0IIM8	1120 aa		7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	PCSK7	Q16549	785 aa		7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	EAPP	Q56P03	285 aa	Predicted RBP	7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	COL13A1	Q5TAT6	717 aa	Predicted RBP	7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	NSUN5	Q96P11	429 aa	Known RBP	7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	IGFLR1	Q9H665	355 aa		7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	SLC6A14	Q9UN76	642 aa		7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.37	□□□□□ -1.23
RAP1B-231	ENST00000544639	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	ELOA3D	A6NLF2	546 aa	Predicted RBP	7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	C1QTNF9B	B2RNN3	333 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	MLLT1	Q03111	559 aa	Predicted RBP	7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	HYAL2	Q12891	473 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	ELOA3B	Q3SY89	546 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	CD163	Q86VB7	1156 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	ELOA3	Q8NG57	546 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	SETDB2	Q96T68	719 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	SALL4	Q9UJQ4	1053 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	WWC3	Q9ULE0	1092 aa		7.36	□□□□□ -1.23
RAP1B-231	ENST00000544639	POLR3D	P05423	398 aa	Predicted RBP	7.35	□□□□□ -1.23
RAP1B-231	ENST00000544639	LDHB	P07195	334 aa	Known RBP	7.35	□□□□□ -1.23
RAP1B-231	ENST00000544639	GALNT12	Q8IXK2	581 aa		7.35	□□□□□ -1.23
RAP1B-231	ENST00000544639	CCDC74A	Q96AQ1	378 aa		7.35	□□□□□ -1.23
RAP1B-231	ENST00000544639	BCL2L13	Q9BXK5	485 aa		7.35	□□□□□ -1.23
RAP1B-231	ENST00000544639	NAGPA	Q9UK23	515 aa		7.35	□□□□□ -1.23
RAP1B-231	ENST00000544639	LOC102724428	A0A0B4J2F2	783 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	EDN3	P14138	238 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	ALAS2	P22557	587 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	SIK1	P57059	783 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	ATP2B2	Q01814	1243 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	ALG1L	Q6GMV1	187 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	HFE2	Q6ZVN8	426 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	FBF1	Q8TES7	1133 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	TRIM11	Q96F44	468 aa		7.34	□□□□□ -1.23
RAP1B-231	ENST00000544639	RBM47	A0AV96	593 aa	Known RBP	7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639		J3QW42	95 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	PRPF40A	O75400	957 aa	Known RBP	7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	FURIN	P09958	794 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	SPATA31C1	P0DKV0	1188 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	CHRNA4	P43681	627 aa		7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	TAGLN	Q01995	201 aa	Known RBP	7.33	□□□□□ -1.24
RAP1B-231	ENST00000544639	XP32	Q5T750	250 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms