RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 CNNM1Q9NRU3 951 aa15.39■□□□□ 0.05
PAAF1-214ENST00000544552 CHMP5Q9NZZ3 219 aa15.39■□□□□ 0.05
PAAF1-214ENST00000544552 PALD1Q9ULE6 856 aa15.39■□□□□ 0.05
PAAF1-214ENST00000544552 RIC1Q4ADV7 1423 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 LAMB2P55268 1798 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 MROH5Q6ZUA9 1318 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 SCN7AQ01118 1682 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 GNPATO15228 680 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 PDE8BO95263 885 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 MAP4K1Q92918 833 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 FAM227BQ96M60 508 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
PAAF1-214ENST00000544552 LRP5O75197 1615 aa15.38■□□□□ 0.05
PAAF1-214ENST00000544552 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
PAAF1-214ENST00000544552 MED23Q9ULK4 1368 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 CCDC171Q6TFL3 1326 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 ZPR1O75312 459 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
PAAF1-214ENST00000544552 SF3B3Q15393 1217 aaKnown RBP15.37■□□□□ 0.05
PAAF1-214ENST00000544552 ATP2B3Q16720 1220 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 EDC3Q96F86 508 aaKnown RBP15.37■□□□□ 0.05
PAAF1-214ENST00000544552 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
PAAF1-214ENST00000544552 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 PAG1Q9NWQ8 432 aa15.37■□□□□ 0.05
PAAF1-214ENST00000544552 ADRA2BP18089 450 aa15.36■□□□□ 0.05
PAAF1-214ENST00000544552 NEK4P51957 841 aa15.36■□□□□ 0.05
PAAF1-214ENST00000544552 PTH1RQ03431 593 aa15.36■□□□□ 0.05
PAAF1-214ENST00000544552 NECTIN1Q15223 517 aa15.36■□□□□ 0.05
PAAF1-214ENST00000544552 GORABQ5T7V8 394 aa15.36■□□□□ 0.05
PAAF1-214ENST00000544552 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
PAAF1-214ENST00000544552 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 FAM177BA6PVY3 158 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 TBC1D9BQ66K14 1250 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 ARHGEF1Q92888 912 aaKnown RBP15.35■□□□□ 0.05
PAAF1-214ENST00000544552 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.05
PAAF1-214ENST00000544552 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 FGFR2P21802 821 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 ADORA1P30542 326 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
PAAF1-214ENST00000544552 NBR1Q14596 966 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 LRRFIP1Q32MZ4 808 aaKnown RBP15.35■□□□□ 0.05
PAAF1-214ENST00000544552 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 TTC39AQ5SRH9 613 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 CAMKK2Q96RR4 588 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 SETDB2Q96T68 719 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 MPHOSPH8Q99549 860 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 HELLSQ9NRZ9 838 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
PAAF1-214ENST00000544552 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
PAAF1-214ENST00000544552 GOLIM4O00461 696 aa15.34■□□□□ 0.05
PAAF1-214ENST00000544552 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
PAAF1-214ENST00000544552 IGHMBP2P38935 993 aaKnown RBP15.34■□□□□ 0.05
PAAF1-214ENST00000544552 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
PAAF1-214ENST00000544552 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
PAAF1-214ENST00000544552 PROM2Q8N271 834 aa15.34■□□□□ 0.05
PAAF1-214ENST00000544552 SPRYD3Q8NCJ5 442 aa15.34■□□□□ 0.05
PAAF1-214ENST00000544552 LPIN2Q92539 896 aa15.34■□□□□ 0.05
PAAF1-214ENST00000544552 CDC5LQ99459 802 aaKnown RBP15.34■□□□□ 0.05
PAAF1-214ENST00000544552 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
PAAF1-214ENST00000544552 TAF5LO75529 589 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 SSFA2P28290 1259 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 ERFEQ4G0M1 354 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 RASEFQ8IZ41 740 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 LRRC4BQ9NT99 713 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 NDUFB9Q9Y6M9 179 aa15.33■□□□□ 0.04
PAAF1-214ENST00000544552 ZFYP08048 801 aaPredicted RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 RFC4P35249 363 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 EZH2Q15910 746 aaKnown RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 TSGA10IPQ3SY00 556 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 RNF20Q5VTR2 975 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 DEFB132Q7Z7B7 95 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 SRP68Q9UHB9 627 aaKnown RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 EP400Q96L91 3159 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 COL24A1Q17RW2 1714 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 UQCRFS1P1P0C7P4 283 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 ZNF589Q86UQ0 364 aaPredicted RBP15.32■□□□□ 0.04
PAAF1-214ENST00000544552 HMG20BQ9P0W2 317 aa15.32■□□□□ 0.04
PAAF1-214ENST00000544552 RNF113AO15541 343 aaKnown RBP15.31■□□□□ 0.04
PAAF1-214ENST00000544552 SLC5A1P13866 664 aa15.31■□□□□ 0.04
PAAF1-214ENST00000544552 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
PAAF1-214ENST00000544552 ARID4AP29374 1257 aaPredicted RBP15.31■□□□□ 0.04
PAAF1-214ENST00000544552 CREB3L3Q68CJ9 461 aa15.31■□□□□ 0.04
PAAF1-214ENST00000544552 PRPF40BQ6NWY9 871 aaKnown RBP15.31■□□□□ 0.04
PAAF1-214ENST00000544552 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
PAAF1-214ENST00000544552 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
PAAF1-214ENST00000544552 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
PAAF1-214ENST00000544552 CUL4AQ13619 759 aa15.3■□□□□ 0.04
PAAF1-214ENST00000544552 TTF1Q15361 905 aaPredicted RBP15.3■□□□□ 0.04
PAAF1-214ENST00000544552 SMIM5Q71RC9 77 aa15.3■□□□□ 0.04
PAAF1-214ENST00000544552 NBPF5PQ86XG9 351 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms