RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 FRRS1LQ9P0K9 344 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 CNTN3Q9P232 1028 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 SALL4Q9UJQ4 1053 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 FAM181BA6NEQ2 426 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 SHISA8B8ZZ34 492 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 CPNE3O75131 537 aaKnown RBP4.18□□□□□ -1.74
YBX3-214ENST00000544501 FMR1Q06787 632 aaKnown RBP eCLIP4.18□□□□□ -1.74
YBX3-214ENST00000544501 CHSY3Q70JA7 882 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 FAM35AQ86V20 835 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 TTC9Q92623 222 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 SPACA7Q96KW9 195 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 NIF3L1Q9GZT8 377 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 PRDM6Q9NQX0 595 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 FOXD3Q9UJU5 478 aaPredicted RBP4.18□□□□□ -1.74
YBX3-214ENST00000544501 AMOTL2Q9Y2J4 779 aa4.18□□□□□ -1.74
YBX3-214ENST00000544501 ANKRD33BA6NCL7 494 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 EIF1AYO14602 144 aaKnown RBP4.17□□□□□ -1.74
YBX3-214ENST00000544501 GHRHP01286 108 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 CYP2E1P05181 493 aaPredicted RBP4.17□□□□□ -1.74
YBX3-214ENST00000544501 EDN3P14138 238 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 AMPD1P23109 780 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 FGD1P98174 961 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 TBC1D8BQ0IIM8 1120 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 ELMSAN1Q6PJG2 1045 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 C20orf204Q6ZNR8 217 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 NCAPG2Q86XI2 1143 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 GALNT12Q8IXK2 581 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 CACTIN-AS1Q8N1I8 211 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 CEP120Q8N960 986 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 NEDD1Q8NHV4 660 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 NSUN5Q96P11 429 aaKnown RBP4.17□□□□□ -1.74
YBX3-214ENST00000544501 CSRNP1Q96S65 589 aa4.17□□□□□ -1.74
YBX3-214ENST00000544501 J3QW42 95 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 PIK3R2O00459 728 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 EREGO14944 169 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 RGS9O75916 674 aaPredicted RBP4.16□□□□□ -1.74
YBX3-214ENST00000544501 CPB1P15086 417 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 EIF2AK2P19525 551 aaKnown RBP4.16□□□□□ -1.74
YBX3-214ENST00000544501 MFAP1P55081 439 aaKnown RBP4.16□□□□□ -1.74
YBX3-214ENST00000544501 MLLT1Q03111 559 aaPredicted RBP4.16□□□□□ -1.74
YBX3-214ENST00000544501 ORC1Q13415 861 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 ENOX2Q16206 610 aaKnown RBP4.16□□□□□ -1.74
YBX3-214ENST00000544501 PERM1Q5SV97 790 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 COL13A1Q5TAT6 717 aaPredicted RBP4.16□□□□□ -1.74
YBX3-214ENST00000544501 PSAPL1Q6NUJ1 521 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 MICALL1Q8N3F8 863 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 FBF1Q8TES7 1133 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 LPIN3Q9BQK8 851 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 NAGPAQ9UK23 515 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 STARD13Q9Y3M8 1113 aa4.16□□□□□ -1.74
YBX3-214ENST00000544501 M0R082 166 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 LILRB5O75023 590 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 SMNDC1O75940 238 aaKnown RBP eCLIP4.15□□□□□ -1.75
YBX3-214ENST00000544501 ALBP02768 609 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 HOXB4P17483 251 aaPredicted RBP4.15□□□□□ -1.75
YBX3-214ENST00000544501 DGKGP49619 791 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 ALG1LQ6GMV1 187 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 HFE2Q6ZVN8 426 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 NPAS4Q8IUM7 802 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 BEND7Q8N7W2 519 aaPredicted RBP4.15□□□□□ -1.75
YBX3-214ENST00000544501 ZNF417Q8TAU3 575 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 CCDC74AQ96AQ1 378 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 PLD4Q96BZ4 506 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 ZNF587Q96SQ5 575 aaPredicted RBP4.15□□□□□ -1.75
YBX3-214ENST00000544501 PBX4Q9BYU1 374 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 DZANK1Q9NVP4 752 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 KANSL3Q9P2N6 904 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 STK17AQ9UEE5 414 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 ADAMTS8Q9UP79 889 aa4.15□□□□□ -1.75
YBX3-214ENST00000544501 PNMA6FA0A0J9YX94 578 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 NFKBIEO00221 500 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 P4HBP07237 508 aaKnown RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 ATP2B2Q01814 1243 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 EAPPQ56P03 285 aaPredicted RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 KIAA0319Q5VV43 1072 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 PEAR1Q5VY43 1037 aaPredicted RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 USPL1Q5W0Q7 1092 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 LINC00114Q6XXX2 140 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 PODNQ7Z5L7 613 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 TMEM102Q8N9M5 508 aaPredicted RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 SCARF2Q96GP6 870 aaPredicted RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 SMG9Q9H0W8 520 aaKnown RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 RRAGCQ9HB90 399 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 JPH1Q9HDC5 661 aaPredicted RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 MKL2Q9ULH7 1088 aa4.14□□□□□ -1.75
YBX3-214ENST00000544501 CCDC9Q9Y3X0 531 aaKnown RBP4.14□□□□□ -1.75
YBX3-214ENST00000544501 A0A1W2PP55 124 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 PDE2AO00408 941 aaPredicted RBP4.13□□□□□ -1.75
YBX3-214ENST00000544501 GNB5O14775 395 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 GIPC1O14908 333 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 POLR3DP05423 398 aaPredicted RBP4.13□□□□□ -1.75
YBX3-214ENST00000544501 MAPK8P45983 427 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 AFF1P51825 1210 aaKnown RBP4.13□□□□□ -1.75
YBX3-214ENST00000544501 COL9A3Q14050 684 aaPredicted RBP4.13□□□□□ -1.75
YBX3-214ENST00000544501 GRIK5Q16478 980 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 ILDR2Q71H61 639 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 NUDT8Q8WV74 236 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 FRMD6Q96NE9 622 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 OSMRQ99650 979 aa4.13□□□□□ -1.75
YBX3-214ENST00000544501 ZKSCAN3Q9BRR0 538 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms