RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 PCCAP05165 728 aaPredicted RBP12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 ARSIQ5FYB1 569 aa12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.447e-7■■■□□ 17.7
RIMKLB-212ENST00000544257 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 DDX60Q8IY21 1712 aaKnown RBP12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 RARSP54136 660 aaKnown RBP12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 FAM89AQ96GI7 184 aa12.3□□□□□ -0.44
RIMKLB-212ENST00000544257 BEND3Q5T5X7 828 aa12.29□□□□□ -0.44
RIMKLB-212ENST00000544257 RPGRQ92834 1020 aaKnown RBP12.29□□□□□ -0.44
RIMKLB-212ENST00000544257 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
RIMKLB-212ENST00000544257 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
RIMKLB-212ENST00000544257 CHD4Q14839 1912 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 F6X3S4 739 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 GCKRQ14397 625 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 SOGA3Q5TF21 947 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 SYNE4Q8N205 404 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 WWC3Q9ULE0 1092 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
RIMKLB-212ENST00000544257 SLX4Q8IY92 1834 aa12.27□□□□□ -0.44
RIMKLB-212ENST00000544257 H7C1W4 665 aa12.27□□□□□ -0.44
RIMKLB-212ENST00000544257 ALDH1L1O75891 902 aa12.27□□□□□ -0.44
RIMKLB-212ENST00000544257 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.44
RIMKLB-212ENST00000544257 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.44
RIMKLB-212ENST00000544257 UTRNP46939 3433 aa12.27□□□□□ -0.45
RIMKLB-212ENST00000544257 PDE8AO60658 829 aa12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 KHSRPQ92945 711 aaKnown RBP eCLIP12.26□□□□□ -0.451e-7■■■□□ 18.4
RIMKLB-212ENST00000544257 PLA2G12BQ9BX93 195 aa12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 API5Q9BZZ5 524 aaKnown RBP12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 SRCIN1Q9C0H9 1055 aa12.26□□□□□ -0.45
RIMKLB-212ENST00000544257 CACNA1SQ13698 1873 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 CASP7P55210 303 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 FOXK1P85037 733 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 NOB1Q9ULX3 412 aaKnown RBP12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 ABCC4O15439 1325 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
RIMKLB-212ENST00000544257 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 FER1L6Q2WGJ9 1857 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 MYH3P11055 1940 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 IPO8O15397 1037 aaKnown RBP12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 C21orf2O43822 256 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 BBOX1O75936 387 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 SLC34A2O95436 690 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 GRAPQ13588 217 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 CCDC93Q567U6 631 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 VARS2Q5ST30 1063 aaKnown RBP12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 UBE3BQ7Z3V4 1068 aa12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 GRAPLQ8TC17 118 aaPredicted RBP12.24□□□□□ -0.45
RIMKLB-212ENST00000544257 SNED1Q8TER0 1413 aa12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 GRM8O00222 908 aa12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 CTSWP56202 376 aa12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 RTKN2Q8IZC4 609 aa12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 UTYO14607 1347 aa12.23□□□□□ -0.45
RIMKLB-212ENST00000544257 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 DSG2Q14126 1118 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 LRRC37AA6NMS7 1700 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 NFKBIEO00221 500 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 BCAR3O75815 825 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 JARID2Q92833 1246 aaPredicted RBP12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 ATP6V0A2Q9Y487 856 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 PCDHGA4Q9Y5G9 962 aa12.22□□□□□ -0.45
RIMKLB-212ENST00000544257 SBF1O95248 1867 aa12.21□□□□□ -0.45
RIMKLB-212ENST00000544257 CSF1RP07333 972 aa12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 YY1P25490 414 aa12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 ATF7IPQ6VMQ6 1270 aa12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 SP8Q8IXZ3 490 aa12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 PSMD1Q99460 953 aa12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.46
RIMKLB-212ENST00000544257 NUDT7P0C024 238 aa12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 LMNB1P20700 586 aa12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 BBXQ8WY36 941 aaPredicted RBP12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
RIMKLB-212ENST00000544257 TRIM27P14373 513 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms