RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 CTSWP56202 376 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 MTX1Q13505 466 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
SP140-214ENST00000544128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
SP140-214ENST00000544128 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 LAMB2P55268 1798 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 MYH3P11055 1940 aa11.8□□□□□ -0.52
SP140-214ENST00000544128 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
SP140-214ENST00000544128 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
SP140-214ENST00000544128 SF3B3Q15393 1217 aaKnown RBP11.79□□□□□ -0.52
SP140-214ENST00000544128 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
SP140-214ENST00000544128 CCDC152Q4G0S7 254 aa11.79□□□□□ -0.52
SP140-214ENST00000544128 GREM2Q9H772 168 aa11.79□□□□□ -0.52
SP140-214ENST00000544128 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
SP140-214ENST00000544128 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
SP140-214ENST00000544128 ITGA6P23229 1130 aa11.78□□□□□ -0.52
SP140-214ENST00000544128 RFX5P48382 616 aaPredicted RBP11.78□□□□□ -0.52
SP140-214ENST00000544128 HTRA3P83110 453 aa11.78□□□□□ -0.52
SP140-214ENST00000544128 IFIT5Q13325 482 aaKnown RBP11.78□□□□□ -0.52
SP140-214ENST00000544128 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
SP140-214ENST00000544128 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
SP140-214ENST00000544128 KCNV2Q8TDN2 545 aa11.78□□□□□ -0.52
SP140-214ENST00000544128 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
SP140-214ENST00000544128 BRIP1Q9BX63 1249 aa11.78□□□□□ -0.52
SP140-214ENST00000544128 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
SP140-214ENST00000544128 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.52
SP140-214ENST00000544128 ANKRD18BA2A2Z9 1011 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
SP140-214ENST00000544128 TAF7LQ5H9L4 462 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
SP140-214ENST00000544128 JMYQ8N9B5 988 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
SP140-214ENST00000544128 KLRG1Q96E93 195 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 SIL1Q9H173 461 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 SEC31BQ9NQW1 1179 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 EXOC6BQ9Y2D4 811 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 KDM2BQ8NHM5 1336 aa11.77□□□□□ -0.53
SP140-214ENST00000544128 APBB1O00213 710 aa11.76□□□□□ -0.53
SP140-214ENST00000544128 PDE6BP35913 854 aa11.76□□□□□ -0.53
SP140-214ENST00000544128 PTPN12Q05209 780 aaKnown RBP11.76□□□□□ -0.53
SP140-214ENST00000544128 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
SP140-214ENST00000544128 RPGRQ92834 1020 aaKnown RBP11.76□□□□□ -0.53
SP140-214ENST00000544128 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
SP140-214ENST00000544128 COPRSQ9NQ92 184 aa11.76□□□□□ -0.53
SP140-214ENST00000544128 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
SP140-214ENST00000544128 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
SP140-214ENST00000544128 TOMM70O94826 608 aa11.75□□□□□ -0.53
SP140-214ENST00000544128 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
SP140-214ENST00000544128 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
SP140-214ENST00000544128 SMC5Q8IY18 1101 aa11.75□□□□□ -0.53
SP140-214ENST00000544128 PUS3Q9BZE2 481 aaKnown RBP11.75□□□□□ -0.53
SP140-214ENST00000544128 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
SP140-214ENST00000544128 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
SP140-214ENST00000544128 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
SP140-214ENST00000544128 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 ANKRD45Q5TZF3 282 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
SP140-214ENST00000544128 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
SP140-214ENST00000544128 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
SP140-214ENST00000544128 TAF1P21675 1872 aa11.74□□□□□ -0.53
SP140-214ENST00000544128 H0YIN7 160 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 EYA2O00167 538 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
SP140-214ENST00000544128 RAB11FIP3O75154 756 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 IGHMBP2P38935 993 aaKnown RBP11.73□□□□□ -0.53
SP140-214ENST00000544128 LDHAL6AQ6ZMR3 332 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
SP140-214ENST00000544128 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
SP140-214ENST00000544128 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 COL4A1P02462 1669 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 SRGNP10124 158 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 NPR1P16066 1061 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 CHRNA5P30532 468 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
SP140-214ENST00000544128 IL15P40933 162 aaPredicted RBP11.72□□□□□ -0.53
SP140-214ENST00000544128 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
SP140-214ENST00000544128 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
SP140-214ENST00000544128 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
SP140-214ENST00000544128 MASTLQ96GX5 879 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
SP140-214ENST00000544128 CIAO1O76071 339 aa11.71□□□□□ -0.53
SP140-214ENST00000544128 SASH1O94885 1247 aa11.71□□□□□ -0.53
SP140-214ENST00000544128 PYGBP11216 843 aa11.71□□□□□ -0.53
SP140-214ENST00000544128 NUCB1Q02818 461 aa11.71□□□□□ -0.53
SP140-214ENST00000544128 TFCP2Q12800 502 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms