RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 MROH5Q6ZUA9 1318 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 BBOX1O75936 387 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 METTL24Q5JXM2 366 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 KIF1BPQ96EK5 621 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 LRRCC1Q9C099 1032 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 BSDC1Q9NW68 430 aaPredicted RBP14.68□□□□□ -0.06
DDB1-223ENST00000543658 ARAP2Q8WZ64 1704 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 MYH13Q9UKX3 1938 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 COL4A1P02462 1669 aa14.68□□□□□ -0.06
DDB1-223ENST00000543658 A0A0G2JLW4 131 aa14.67□□□□□ -0.06
DDB1-223ENST00000543658 DPEP1P16444 411 aa14.67□□□□□ -0.06
DDB1-223ENST00000543658 LRRC24Q50LG9 513 aa14.67□□□□□ -0.06
DDB1-223ENST00000543658 ANKRD45Q5TZF3 282 aa14.67□□□□□ -0.06
DDB1-223ENST00000543658 TTLL6Q8N841 843 aa14.67□□□□□ -0.06
DDB1-223ENST00000543658 CEP126Q9P2H0 1117 aa14.67□□□□□ -0.06
DDB1-223ENST00000543658 KCNJ4P48050 445 aa14.66□□□□□ -0.06
DDB1-223ENST00000543658 PRPF40BQ6NWY9 871 aaKnown RBP14.66□□□□□ -0.06
DDB1-223ENST00000543658 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
DDB1-223ENST00000543658 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
DDB1-223ENST00000543658 RHPN1Q8TCX5 695 aa14.66□□□□□ -0.06
DDB1-223ENST00000543658 PUS3Q9BZE2 481 aaKnown RBP14.66□□□□□ -0.06
DDB1-223ENST00000543658 ANKRD2Q9GZV1 360 aa14.66□□□□□ -0.06
DDB1-223ENST00000543658 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
DDB1-223ENST00000543658 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
DDB1-223ENST00000543658 FHDC1Q9C0D6 1143 aaPredicted RBP14.65□□□□□ -0.06
DDB1-223ENST00000543658 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
DDB1-223ENST00000543658 AKAP2Q9Y2D5 859 aa14.65□□□□□ -0.06
DDB1-223ENST00000543658 CHRNDQ07001 517 aa14.64□□□□□ -0.07
DDB1-223ENST00000543658 TFCP2Q12800 502 aa14.64□□□□□ -0.07
DDB1-223ENST00000543658 ATG9AQ7Z3C6 839 aa14.64□□□□□ -0.07
DDB1-223ENST00000543658 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
DDB1-223ENST00000543658 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
DDB1-223ENST00000543658 XDHP47989 1333 aa14.64□□□□□ -0.07
DDB1-223ENST00000543658 DALRD3Q5D0E6 543 aaKnown RBP14.63□□□□□ -0.07
DDB1-223ENST00000543658 SOGA3Q5TF21 947 aa14.63□□□□□ -0.07
DDB1-223ENST00000543658 SP8Q8IXZ3 490 aa14.63□□□□□ -0.07
DDB1-223ENST00000543658 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
DDB1-223ENST00000543658 MINPP1Q9UNW1 487 aa14.63□□□□□ -0.07
DDB1-223ENST00000543658 ATP6V0A2Q9Y487 856 aa14.63□□□□□ -0.07
DDB1-223ENST00000543658 ZNF609O15014 1411 aa14.63□□□□□ -0.07
DDB1-223ENST00000543658 AK9Q5TCS8 1911 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 SMARCA5O60264 1052 aaPredicted RBP14.62□□□□□ -0.07
DDB1-223ENST00000543658 SASH1O94885 1247 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 PDE8BO95263 885 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 IFIT2P09913 472 aaKnown RBP14.62□□□□□ -0.07
DDB1-223ENST00000543658 SLC5A1P13866 664 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 NUCB1Q02818 461 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 LTBP1Q14766 1721 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 PUM3Q15397 648 aaKnown RBP14.62□□□□□ -0.07
DDB1-223ENST00000543658 ATP2B3Q16720 1220 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 AACSQ86V21 672 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 CHD1LQ86WJ1 897 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 HELBQ8NG08 1087 aaPredicted RBP14.62□□□□□ -0.07
DDB1-223ENST00000543658 GPATCH3Q96I76 525 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 LNPKQ9C0E8 428 aa14.62□□□□□ -0.07
DDB1-223ENST00000543658 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
DDB1-223ENST00000543658 TAF5LO75529 589 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 IFIT1P09914 478 aaKnown RBP14.61□□□□□ -0.07
DDB1-223ENST00000543658 GRIPAP1Q4V328 841 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 CCDC93Q567U6 631 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 TNNI3KQ59H18 835 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 MPNDQ8N594 471 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 NLGN2Q8NFZ4 835 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 GPR108Q9NPR9 543 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 GGA1Q9UJY5 639 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 WWC3Q9ULE0 1092 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 BCS1LQ9Y276 419 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 FPGT-TNNI3KV9GXZ4 949 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
DDB1-223ENST00000543658 C21orf2O43822 256 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 KCNA3P22001 575 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 ATP2B4P23634 1241 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 UBE4AQ14139 1066 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 DPP8Q6V1X1 898 aaPredicted RBP14.6□□□□□ -0.07
DDB1-223ENST00000543658 SYT17Q9BSW7 474 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 CCDC88AQ3V6T2 1871 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 CHD4Q14839 1912 aa14.6□□□□□ -0.07
DDB1-223ENST00000543658 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 UFL1O94874 794 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 GPSM2P81274 684 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 VGLL2Q8N8G2 317 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 SUPT20HQ8NEM7 779 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 LPIN2Q92539 896 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 ZNF804BA4D1E1 1349 aa14.59□□□□□ -0.07
DDB1-223ENST00000543658 RTKN2Q8IZC4 609 aa14.58□□□□□ -0.08
DDB1-223ENST00000543658 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
DDB1-223ENST00000543658 EYA3Q99504 573 aa14.58□□□□□ -0.08
DDB1-223ENST00000543658 CCDC8Q9H0W5 538 aaPredicted RBP14.58□□□□□ -0.08
DDB1-223ENST00000543658 PODXL2Q9NZ53 605 aa14.58□□□□□ -0.08
DDB1-223ENST00000543658 G3V3G9 751 aa14.57□□□□□ -0.08
DDB1-223ENST00000543658 CAVIN4Q5BKX8 364 aa14.57□□□□□ -0.08
DDB1-223ENST00000543658 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
DDB1-223ENST00000543658 DCAF8Q5TAQ9 597 aa14.57□□□□□ -0.08
DDB1-223ENST00000543658 VPS37DQ86XT2 251 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms