RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
TPBG-203ENST00000543496 CCDC73Q6ZRK6 1079 aa20.24■□□□□ 0.83
TPBG-203ENST00000543496 DHX40Q8IX18 779 aaKnown RBP20.24■□□□□ 0.83
TPBG-203ENST00000543496 CCAR2Q8N163 923 aaKnown RBP20.24■□□□□ 0.83
TPBG-203ENST00000543496 SCRN1Q12765 414 aa20.24■□□□□ 0.83
TPBG-203ENST00000543496 AOPEPQ8N6M6 819 aa20.24■□□□□ 0.83
TPBG-203ENST00000543496 KINO60870 393 aaKnown RBP20.23■□□□□ 0.83
TPBG-203ENST00000543496 TERF2Q15554 542 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
TPBG-203ENST00000543496 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 COL15A1P39059 1388 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 CTAGE5O15320 804 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 ADD1P35611 737 aaKnown RBP20.23■□□□□ 0.83
TPBG-203ENST00000543496 KRT32Q14532 448 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
TPBG-203ENST00000543496 ERO1AQ96HE7 468 aa20.23■□□□□ 0.83
TPBG-203ENST00000543496 SEC62Q99442 399 aaKnown RBP20.22■□□□□ 0.83
TPBG-203ENST00000543496 USP28Q96RU2 1077 aa20.22■□□□□ 0.83
TPBG-203ENST00000543496 ST7Q9NRC1 585 aa20.22■□□□□ 0.83
TPBG-203ENST00000543496 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
TPBG-203ENST00000543496 SNW1Q13573 536 aaKnown RBP20.21■□□□□ 0.83
TPBG-203ENST00000543496 ANO10Q9NW15 660 aa20.21■□□□□ 0.83
TPBG-203ENST00000543496 SLU7O95391 586 aaKnown RBP20.21■□□□□ 0.83
TPBG-203ENST00000543496 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
TPBG-203ENST00000543496 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
TPBG-203ENST00000543496 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
TPBG-203ENST00000543496 ME1P48163 572 aa20.2■□□□□ 0.83
TPBG-203ENST00000543496 IRX5P78411 483 aaPredicted RBP20.2■□□□□ 0.83
TPBG-203ENST00000543496 TAF3Q5VWG9 929 aa20.2■□□□□ 0.83
TPBG-203ENST00000543496 LINS1Q8NG48 757 aa20.2■□□□□ 0.83
TPBG-203ENST00000543496 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.83
TPBG-203ENST00000543496 CYP21A2P08686 494 aa20.2■□□□□ 0.82
TPBG-203ENST00000543496 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.82
TPBG-203ENST00000543496 CEP57L1Q8IYX8 460 aa20.2■□□□□ 0.82
TPBG-203ENST00000543496 FSIP1Q8NA03 581 aa20.2■□□□□ 0.82
TPBG-203ENST00000543496 ERBB3P21860 1342 aa20.2■□□□□ 0.82
TPBG-203ENST00000543496 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
TPBG-203ENST00000543496 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
TPBG-203ENST00000543496 DNAJC2Q99543 621 aaKnown RBP20.19■□□□□ 0.82
TPBG-203ENST00000543496 JCADQ9P266 1359 aa20.19■□□□□ 0.82
TPBG-203ENST00000543496 LRRC59Q96AG4 307 aaKnown RBP20.19■□□□□ 0.82
TPBG-203ENST00000543496 ERICH4A6NGS2 130 aa20.18■□□□□ 0.82
TPBG-203ENST00000543496 CCDC9Q9Y3X0 531 aaKnown RBP20.18■□□□□ 0.82
TPBG-203ENST00000543496 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
TPBG-203ENST00000543496 FAM160A1Q05DH4 1040 aa20.18■□□□□ 0.82
TPBG-203ENST00000543496 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
TPBG-203ENST00000543496 SMARCC2Q8TAQ2 1214 aa20.18■□□□□ 0.82
TPBG-203ENST00000543496 PTPDC1A2A3K4 754 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 APOBRQ0VD83 1088 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 NBPF11Q86T75 865 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 ENGASEQ8NFI3 743 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 ERCC6LQ2NKX8 1250 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 NCOA5Q9HCD5 579 aaKnown RBP20.17■□□□□ 0.82
TPBG-203ENST00000543496 ZNF446Q9NWS9 450 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 CTDNEP1O95476 244 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 STOX1Q6ZVD7 989 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 LRRN4CLQ8ND94 238 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 SDF4Q9BRK5 362 aa20.17■□□□□ 0.82
TPBG-203ENST00000543496 U3KPZ7 1027 aaPredicted RBP20.17■□□□□ 0.82
TPBG-203ENST00000543496 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
TPBG-203ENST00000543496 SMC2O95347 1197 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 EPHA10Q5JZY3 1008 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 SYT10Q6XYQ8 523 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 DBNLQ9UJU6 430 aaKnown RBP20.16■□□□□ 0.82
TPBG-203ENST00000543496 PFKFB2O60825 505 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 GSDMDP57764 484 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 E4F1Q66K89 784 aaPredicted RBP20.16■□□□□ 0.82
TPBG-203ENST00000543496 NAA16Q6N069 864 aaPredicted RBP20.16■□□□□ 0.82
TPBG-203ENST00000543496 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 RIC3Q7Z5B4 369 aa20.16■□□□□ 0.82
TPBG-203ENST00000543496 NAT10Q9H0A0 1025 aaKnown RBP20.16■□□□□ 0.82
TPBG-203ENST00000543496 ZNF609O15014 1411 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 TMC6Q7Z403 805 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 ZNF396Q96N95 335 aaPredicted RBP20.15■□□□□ 0.82
TPBG-203ENST00000543496 FMNL2Q96PY5 1086 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 A0A1B0GVL5 298 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
TPBG-203ENST00000543496 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
TPBG-203ENST00000543496 IGKV5-2P06315 115 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
TPBG-203ENST00000543496 IP6K1Q92551 441 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 FAM53CQ9NYF3 392 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
TPBG-203ENST00000543496 MYH15Q9Y2K3 1946 aa20.14■□□□□ 0.82
TPBG-203ENST00000543496 CERS3Q8IU89 383 aa20.14■□□□□ 0.82
TPBG-203ENST00000543496 LLPHQ9BRT6 129 aaKnown RBP20.14■□□□□ 0.82
TPBG-203ENST00000543496 SLFNL1Q499Z3 407 aa20.14■□□□□ 0.81
TPBG-203ENST00000543496 PPP1R13BQ96KQ4 1090 aa20.14■□□□□ 0.81
TPBG-203ENST00000543496 XPO4Q9C0E2 1151 aaKnown RBP20.14■□□□□ 0.81
TPBG-203ENST00000543496 IFNKQ9P0W0 207 aa20.14■□□□□ 0.81
TPBG-203ENST00000543496 UTYO14607 1347 aa20.14■□□□□ 0.81
TPBG-203ENST00000543496 KIF2AO00139 706 aaPredicted RBP20.13■□□□□ 0.81
TPBG-203ENST00000543496 TFCP2Q12800 502 aa20.13■□□□□ 0.81
TPBG-203ENST00000543496 ZRSR1Q15695 479 aaKnown RBP20.13■□□□□ 0.81
TPBG-203ENST00000543496 DPCR1Q3MIW9 517 aa20.13■□□□□ 0.81
TPBG-203ENST00000543496 PLEKHO1Q53GL0 409 aaPredicted RBP20.13■□□□□ 0.81
TPBG-203ENST00000543496 C1orf141Q5JVX7 400 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms