RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ECHDC1Q9NTX5 307 aa16.83■□□□□ 0.29
PRAME-214ENST00000543184 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.29
PRAME-214ENST00000543184 CCDC171Q6TFL3 1326 aa16.83■□□□□ 0.29
PRAME-214ENST00000543184 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 FTOQ9C0B1 505 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRAME-214ENST00000543184 MAP3K2Q9Y2U5 619 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 SLC27A2O14975 620 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.28
PRAME-214ENST00000543184 ZNF589Q86UQ0 364 aaPredicted RBP16.83■□□□□ 0.28
PRAME-214ENST00000543184 SEPT12Q8IYM1 358 aa16.83■□□□□ 0.28
PRAME-214ENST00000543184 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
PRAME-214ENST00000543184 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
PRAME-214ENST00000543184 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
PRAME-214ENST00000543184 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
PRAME-214ENST00000543184 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
PRAME-214ENST00000543184 CABP4P57796 275 aa16.82■□□□□ 0.28
PRAME-214ENST00000543184 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
PRAME-214ENST00000543184 RUFY2Q8WXA3 655 aa16.81■□□□□ 0.28
PRAME-214ENST00000543184 PGBD1Q96JS3 809 aa16.81■□□□□ 0.28
PRAME-214ENST00000543184 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
PRAME-214ENST00000543184 USP27XA6NNY8 438 aa16.81■□□□□ 0.28
PRAME-214ENST00000543184 CACTINQ8WUQ7 758 aaKnown RBP16.81■□□□□ 0.28
PRAME-214ENST00000543184 ADCY9O60503 1353 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 TNNT1P13805 278 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 NCBP1Q09161 790 aaKnown RBP16.8■□□□□ 0.28
PRAME-214ENST00000543184 GOLGA6L6A8MZA4 724 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 SASH1O94885 1247 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 SLFNL1Q499Z3 407 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
PRAME-214ENST00000543184 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
PRAME-214ENST00000543184 NPHP1O15259 732 aa16.79■□□□□ 0.28
PRAME-214ENST00000543184 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
PRAME-214ENST00000543184 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
PRAME-214ENST00000543184 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
PRAME-214ENST00000543184 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
PRAME-214ENST00000543184 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
PRAME-214ENST00000543184 ASAP1Q9ULH1 1129 aa16.79■□□□□ 0.28
PRAME-214ENST00000543184 ZNF165P49910 485 aa16.78■□□□□ 0.28
PRAME-214ENST00000543184 ZNF75DP51815 510 aa16.78■□□□□ 0.28
PRAME-214ENST00000543184 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
PRAME-214ENST00000543184 DCAF5Q96JK2 942 aa16.78■□□□□ 0.28
PRAME-214ENST00000543184 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
PRAME-214ENST00000543184 ANKRD7Q92527 254 aa16.78■□□□□ 0.28
PRAME-214ENST00000543184 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
PRAME-214ENST00000543184 TRMT1Q9NXH9 659 aaKnown RBP16.78■□□□□ 0.28
PRAME-214ENST00000543184 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
PRAME-214ENST00000543184 MAP4K1Q92918 833 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
PRAME-214ENST00000543184 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 TTC41PQ6P2S7 1318 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 C11orf57Q6ZUT1 292 aaPredicted RBP16.77■□□□□ 0.28
PRAME-214ENST00000543184 EVI5LQ96CN4 794 aa16.77■□□□□ 0.28
PRAME-214ENST00000543184 PIGBQ92521 554 aa16.77■□□□□ 0.27
PRAME-214ENST00000543184 KAZALD1Q96I82 304 aa16.77■□□□□ 0.27
PRAME-214ENST00000543184 BRF1Q92994 677 aa16.76■□□□□ 0.27
PRAME-214ENST00000543184 EPB41L2O43491 1005 aaKnown RBP16.76■□□□□ 0.27
PRAME-214ENST00000543184 HSP90B1P14625 803 aaKnown RBP16.76■□□□□ 0.27
PRAME-214ENST00000543184 GUCY1B3Q02153 619 aa16.76■□□□□ 0.27
PRAME-214ENST00000543184 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
PRAME-214ENST00000543184 ZNF496Q96IT1 587 aaPredicted RBP16.76■□□□□ 0.27
PRAME-214ENST00000543184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRAME-214ENST00000543184 ZNF330Q9Y3S2 320 aaPredicted RBP16.76■□□□□ 0.27
PRAME-214ENST00000543184 DISP2A7MBM2 1401 aa16.76■□□□□ 0.27
PRAME-214ENST00000543184 NRAPQ86VF7 1730 aa16.75■□□□□ 0.27
PRAME-214ENST00000543184 CTIFO43310 598 aaKnown RBP16.75■□□□□ 0.27
PRAME-214ENST00000543184 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
PRAME-214ENST00000543184 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
PRAME-214ENST00000543184 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
PRAME-214ENST00000543184 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
PRAME-214ENST00000543184 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
PRAME-214ENST00000543184 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
PRAME-214ENST00000543184 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
PRAME-214ENST00000543184 THRAP3Q9Y2W1 955 aaKnown RBP16.74■□□□□ 0.27
PRAME-214ENST00000543184 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRAME-214ENST00000543184 PLA2G4DQ86XP0 818 aa16.74■□□□□ 0.27
PRAME-214ENST00000543184 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
PRAME-214ENST00000543184 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
PRAME-214ENST00000543184 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 ZNF790Q6PG37 636 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
PRAME-214ENST00000543184 RXRBP28702 533 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
PRAME-214ENST00000543184 SMIM5Q71RC9 77 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 TTC5Q8N0Z6 440 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 GLI3P10071 1580 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 ABCC6O95255 1503 aa16.73■□□□□ 0.27
PRAME-214ENST00000543184 H3BQV1 296 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 MYL6BP14649 208 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
PRAME-214ENST00000543184 IFFO2Q5TF58 517 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms