RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 RTL1A6NKG5 1358 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 USP47Q96K76 1375 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 FBLN1P23142 703 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
RFC5-209ENST00000543153 PHTF2Q8N3S3 785 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 MRGPRX2Q96LB1 330 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 CDK15Q96Q40 435 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 SYT17Q9BSW7 474 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 TFCP2L1Q9NZI6 479 aa14.01□□□□□ -0.17
RFC5-209ENST00000543153 MAFBQ9Y5Q3 323 aaPredicted RBP14.01□□□□□ -0.17
RFC5-209ENST00000543153 LZTS3O60299 673 aaPredicted RBP14□□□□□ -0.17
RFC5-209ENST00000543153 POLD1P28340 1107 aa14□□□□□ -0.17
RFC5-209ENST00000543153 FOXC1Q12948 553 aa14□□□□□ -0.17
RFC5-209ENST00000543153 SLC27A3Q5K4L6 730 aa14□□□□□ -0.17
RFC5-209ENST00000543153 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
RFC5-209ENST00000543153 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
RFC5-209ENST00000543153 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
RFC5-209ENST00000543153 CDCA8Q53HL2 280 aa13.99□□□□□ -0.17
RFC5-209ENST00000543153 HOMEZQ8IX15 550 aa13.99□□□□□ -0.17
RFC5-209ENST00000543153 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
RFC5-209ENST00000543153 PLPP7Q8NBV4 271 aa13.99□□□□□ -0.17
RFC5-209ENST00000543153 PAPPAQ13219 1627 aa13.99□□□□□ -0.17
RFC5-209ENST00000543153 ESPNB1AK53 854 aa13.98□□□□□ -0.17
RFC5-209ENST00000543153 SIAH2O43255 324 aa13.98□□□□□ -0.17
RFC5-209ENST00000543153 KCNQ4P56696 695 aa13.98□□□□□ -0.17
RFC5-209ENST00000543153 PBXIP1Q96AQ6 731 aa13.98□□□□□ -0.17
RFC5-209ENST00000543153 MEGF6O75095 1541 aa13.98□□□□□ -0.17
RFC5-209ENST00000543153 USP17L5A8MUK1 530 aa13.97□□□□□ -0.17
RFC5-209ENST00000543153 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
RFC5-209ENST00000543153 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
RFC5-209ENST00000543153 DOLKQ9UPQ8 538 aa13.97□□□□□ -0.17
RFC5-209ENST00000543153 DOT1LQ8TEK3 1739 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 KAT6BQ8WYB5 2073 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 FYB1O15117 783 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 TATP17735 454 aaPredicted RBP13.96□□□□□ -0.17
RFC5-209ENST00000543153 RAB15P59190 212 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 GPR162Q16538 588 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 TLL2Q9Y6L7 1015 aa13.96□□□□□ -0.17
RFC5-209ENST00000543153 USP17L3A6NCW0 530 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 USP17L4A6NCW7 530 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 DHX9Q08211 1270 aaKnown RBP13.95□□□□□ -0.18
RFC5-209ENST00000543153 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 USP17L2Q6R6M4 530 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 USP17L1Q7RTZ2 530 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 SLC16A10Q8TF71 515 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 FLT4P35916 1363 aa13.95□□□□□ -0.18
RFC5-209ENST00000543153 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
RFC5-209ENST00000543153 RGS20O76081 388 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 ADH1CP00326 375 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 NR5A1Q13285 461 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 EML3Q32P44 896 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 VRTNQ9H8Y1 702 aa13.94□□□□□ -0.18
RFC5-209ENST00000543153 FSHRP23945 695 aa13.93□□□□□ -0.18
RFC5-209ENST00000543153 INTS6LQ5JSJ4 861 aaKnown RBP13.93□□□□□ -0.18
RFC5-209ENST00000543153 ZNF784Q8NCA9 323 aaPredicted RBP13.93□□□□□ -0.18
RFC5-209ENST00000543153 SNIP1Q8TAD8 396 aaKnown RBP13.93□□□□□ -0.18
RFC5-209ENST00000543153 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
RFC5-209ENST00000543153 PKD2L1Q9P0L9 805 aa13.93□□□□□ -0.18
RFC5-209ENST00000543153 PCDHB11Q9Y5F2 797 aa13.93□□□□□ -0.18
RFC5-209ENST00000543153 NSD3Q9BZ95 1437 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.92□□□□□ -0.18
RFC5-209ENST00000543153 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 GRM5P41594 1212 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 HSP90AB2PQ58FF8 381 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 CCDC85AQ96PX6 553 aaPredicted RBP13.92□□□□□ -0.18
RFC5-209ENST00000543153 NSD2O96028 1365 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 INSRP06213 1382 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
RFC5-209ENST00000543153 TTC24A2A3L6 582 aaPredicted RBP13.91□□□□□ -0.18
RFC5-209ENST00000543153 NCOA4Q13772 614 aa13.91□□□□□ -0.18
RFC5-209ENST00000543153 CYP4X1Q8N118 509 aa13.91□□□□□ -0.18
RFC5-209ENST00000543153 WASF2Q9Y6W5 498 aa13.91□□□□□ -0.18
RFC5-209ENST00000543153 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
RFC5-209ENST00000543153 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 USP4Q13107 963 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 TSGA10IPQ3SY00 556 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 OXLD1Q5BKU9 147 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 TRAF7Q6Q0C0 670 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 MPRIPQ6WCQ1 1025 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
RFC5-209ENST00000543153 KIF24Q5T7B8 1368 aa13.89□□□□□ -0.19
RFC5-209ENST00000543153 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
RFC5-209ENST00000543153 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
RFC5-209ENST00000543153 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
RFC5-209ENST00000543153 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
RFC5-209ENST00000543153 MKRN1Q9UHC7 482 aaKnown RBP13.89□□□□□ -0.19
RFC5-209ENST00000543153 NOD1Q9Y239 953 aa13.89□□□□□ -0.19
RFC5-209ENST00000543153 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
RFC5-209ENST00000543153 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
RFC5-209ENST00000543153 ERVH48-1M5A8F1 160 aa13.88□□□□□ -0.19
RFC5-209ENST00000543153 GDF9O60383 454 aa13.88□□□□□ -0.19
RFC5-209ENST00000543153 CCDC116Q8IYX3 515 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms