RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 COL13A1Q5TAT6 717 aaPredicted RBP7.3□□□□□ -1.24
MDM2-229ENST00000543046 PSAPL1Q6NUJ1 521 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 C8orf86Q6ZUL3 223 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 SNX29Q8TEQ0 813 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 NUDT8Q8WV74 236 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 FAM129BQ96TA1 746 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 LPIN3Q9BQK8 851 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 RBCK1Q9BYM8 510 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 CHRDQ9H2X0 955 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
MDM2-229ENST00000543046 DCTN4Q9UJW0 460 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 GHRHP01286 108 aa7.29□□□□□ -1.24
MDM2-229ENST00000543046 ELMSAN1Q6PJG2 1045 aa7.29□□□□□ -1.24
MDM2-229ENST00000543046 TMC1Q8TDI8 760 aa7.29□□□□□ -1.24
MDM2-229ENST00000543046 JPH1Q9HDC5 661 aaPredicted RBP7.29□□□□□ -1.24
MDM2-229ENST00000543046 FRRS1LQ9P0K9 344 aa7.29□□□□□ -1.24
MDM2-229ENST00000543046 KANSL3Q9P2N6 904 aa7.29□□□□□ -1.24
MDM2-229ENST00000543046 LILRB5O75023 590 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 PHACTR2O75167 634 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 RGS9O75916 674 aaPredicted RBP7.28□□□□□ -1.24
MDM2-229ENST00000543046 KIF4AO95239 1232 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 CES1P23141 567 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 MAPK1P28482 360 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 PMEPA1Q969W9 287 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 PRDM6Q9NQX0 595 aa7.28□□□□□ -1.24
MDM2-229ENST00000543046 RNF225M0QZC1 329 aaPredicted RBP7.27□□□□□ -1.25
MDM2-229ENST00000543046 GNB5O14775 395 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 GPR182O15218 404 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 IGHA2P01877 340 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 SND1Q7KZF4 910 aaKnown RBP eCLIP7.27□□□□□ -1.25
MDM2-229ENST00000543046 NCAPG2Q86XI2 1143 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 PLD4Q96BZ4 506 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 SPACA7Q96KW9 195 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 DMRTB1Q96MA1 342 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 SMG9Q9H0W8 520 aaKnown RBP7.27□□□□□ -1.25
MDM2-229ENST00000543046 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 SALL4Q9UJQ4 1053 aa7.27□□□□□ -1.25
MDM2-229ENST00000543046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.27□□□□□ -1.25
MDM2-229ENST00000543046 PIK3R2O00459 728 aa7.26□□□□□ -1.25
MDM2-229ENST00000543046 EREGO14944 169 aa7.26□□□□□ -1.25
MDM2-229ENST00000543046 COL9A3Q14050 684 aaPredicted RBP7.26□□□□□ -1.25
MDM2-229ENST00000543046 TMC7Q7Z402 723 aa7.26□□□□□ -1.25
MDM2-229ENST00000543046 NEFLP07196 543 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 NID1P14543 1247 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 IRS1P35568 1242 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 AFF1P51825 1210 aaKnown RBP7.25□□□□□ -1.25
MDM2-229ENST00000543046 TTC9Q92623 222 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 TRIM11Q96F44 468 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 NIF3L1Q9GZT8 377 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 SUV39H2Q9H5I1 410 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 ZFYVE28Q9HCC9 887 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 AMOTL2Q9Y2J4 779 aa7.25□□□□□ -1.25
MDM2-229ENST00000543046 ATP11AP98196 1134 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 KCNMA1Q12791 1236 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 ORC1Q13415 861 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 GRIK5Q16478 980 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 CEP120Q8N960 986 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 ALKBH8Q96BT7 664 aaKnown RBP7.24□□□□□ -1.25
MDM2-229ENST00000543046 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 RASSF4Q9H2L5 321 aa7.24□□□□□ -1.25
MDM2-229ENST00000543046 ACPPP15309 386 aa7.23□□□□□ -1.25
MDM2-229ENST00000543046 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
MDM2-229ENST00000543046 NOP53Q9NZM5 478 aaKnown RBP7.23□□□□□ -1.25
MDM2-229ENST00000543046 CPNE3O75131 537 aaKnown RBP7.22□□□□□ -1.25
MDM2-229ENST00000543046 POLR3DP05423 398 aaPredicted RBP7.22□□□□□ -1.25
MDM2-229ENST00000543046 EDN3P14138 238 aa7.22□□□□□ -1.25
MDM2-229ENST00000543046 USPL1Q5W0Q7 1092 aa7.22□□□□□ -1.25
MDM2-229ENST00000543046 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
MDM2-229ENST00000543046 ZSCAN29Q8IWY8 852 aaPredicted RBP7.22□□□□□ -1.25
MDM2-229ENST00000543046 ASB16Q96NS5 453 aa7.22□□□□□ -1.25
MDM2-229ENST00000543046 PBX4Q9BYU1 374 aa7.22□□□□□ -1.25
MDM2-229ENST00000543046 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
MDM2-229ENST00000543046 ZBTB7CA1YPR0 619 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 EIF1AYO14602 144 aaKnown RBP7.21□□□□□ -1.26
MDM2-229ENST00000543046 TREHO43280 583 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
MDM2-229ENST00000543046 COL8A1P27658 744 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 GSK3AP49840 483 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 TRAPPC3LQ5T215 181 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 GDF6Q6KF10 455 aaPredicted RBP7.21□□□□□ -1.26
MDM2-229ENST00000543046 DNAJC25Q9H1X3 360 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 DZANK1Q9NVP4 752 aa7.21□□□□□ -1.26
MDM2-229ENST00000543046 NFKBIEO00221 500 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 TRPA1O75762 1119 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 PLCB3Q01970 1234 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 RASSF7Q02833 373 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 DSC3Q14574 896 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 PEAR1Q5VY43 1037 aaPredicted RBP7.2□□□□□ -1.26
MDM2-229ENST00000543046 WFDC8Q8IUA0 241 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 GALNT12Q8IXK2 581 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 DMRTC2Q8IXT2 367 aaPredicted RBP7.2□□□□□ -1.26
MDM2-229ENST00000543046 CSRNP1Q96S65 589 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 OSMRQ99650 979 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 ZKSCAN3Q9BRR0 538 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 LATS2Q9NRM7 1088 aa7.2□□□□□ -1.26
MDM2-229ENST00000543046 ILDR2Q71H61 639 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms