RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 TMEM132AQ24JP5 1023 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 MOB2Q70IA6 237 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 RASAL3Q86YV0 1011 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 SULF1Q8IWU6 871 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 MPNDQ8N594 471 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 IL17REQ8NFR9 667 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 ABCC12Q96J65 1359 aa6.44□□□□□ -1.38
LIMS1-214ENST00000542845 SNED1Q8TER0 1413 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 GNAT3A8MTJ3 354 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 UBE2Q2LH0YL09 131 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 RIMBP2O15034 1052 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 HOXA10P31260 410 aaPredicted RBP6.43□□□□□ -1.38
LIMS1-214ENST00000542845 PSEN1P49768 467 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 CRY2Q49AN0 593 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 CDCA5Q96FF9 252 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 CRAMP1Q96RY5 1269 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 VPS33BQ9H267 617 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 R3HDMLQ9H3Y0 253 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 SCAF8Q9UPN6 1271 aaKnown RBP6.43□□□□□ -1.38
LIMS1-214ENST00000542845 TRIM17Q9Y577 477 aa6.43□□□□□ -1.38
LIMS1-214ENST00000542845 ASTN2O75129 1339 aaPredicted RBP6.43□□□□□ -1.38
LIMS1-214ENST00000542845 NUP98P52948 1817 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 YDJCA8MPS7 323 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 NBPF26B4DH59 902 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 H0YGN5 161 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 PSMD14O00487 310 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 MYCP01106 439 aaPredicted RBP6.42□□□□□ -1.38
LIMS1-214ENST00000542845 CNGB1Q14028 1251 aaPredicted RBP6.42□□□□□ -1.38
LIMS1-214ENST00000542845 SUSD4Q5VX71 490 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 INTS3Q68E01 1043 aaKnown RBP6.42□□□□□ -1.38
LIMS1-214ENST00000542845 NBPF10Q6P3W6 841 aaKnown RBP6.42□□□□□ -1.38
LIMS1-214ENST00000542845 C3orf67Q6ZVT6 689 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 NLRP3Q96P20 1036 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 PANK3Q9H999 370 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 DBNDD1Q9H9R9 158 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 KCNQ5Q9NR82 932 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 GGA3Q9NZ52 723 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 RRP7AQ9Y3A4 280 aaKnown RBP6.42□□□□□ -1.38
LIMS1-214ENST00000542845 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 CDHR2Q9BYE9 1310 aa6.42□□□□□ -1.38
LIMS1-214ENST00000542845 G3V3G9 751 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 U2SURPO15042 1029 aaKnown RBP6.41□□□□□ -1.38
LIMS1-214ENST00000542845 SNRPA1P09661 255 aaKnown RBP6.41□□□□□ -1.38
LIMS1-214ENST00000542845 MYL6BP14649 208 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 KIAA2012Q0VF49 1180 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 PRKG1Q13976 671 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 DOK7Q18PE1 504 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 KIF4BQ2VIQ3 1234 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 ANGEL2Q5VTE6 544 aaKnown RBP6.41□□□□□ -1.38
LIMS1-214ENST00000542845 PRAMEF18Q5VWM3 479 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 TMEM106CQ9BVX2 250 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 ZBTB3Q9H5J0 574 aa6.41□□□□□ -1.38
LIMS1-214ENST00000542845 SIPA1L3O60292 1781 aaPredicted RBP6.41□□□□□ -1.38
LIMS1-214ENST00000542845 C6orf229H3BNL8 230 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 DIAPH1O60610 1272 aaKnown RBP6.4□□□□□ -1.38
LIMS1-214ENST00000542845 TM4SF4P48230 202 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 SCARF1Q14162 830 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 WASHC4Q2M389 1173 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 SLC4A8Q2Y0W8 1093 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 KIF6Q6ZMV9 814 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 OTOP1Q7RTM1 612 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 SP8Q8IXZ3 490 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 DPF3Q92784 378 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 DPF2Q92785 391 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 ZNF428Q96B54 188 aa6.4□□□□□ -1.38
LIMS1-214ENST00000542845 RTFDC1Q9BY42 306 aaPredicted RBP6.4□□□□□ -1.38
LIMS1-214ENST00000542845 ABCC4O15439 1325 aa6.4□□□□□ -1.39
LIMS1-214ENST00000542845 KIF7Q2M1P5 1343 aa6.4□□□□□ -1.39
LIMS1-214ENST00000542845 TAF1P21675 1872 aa6.4□□□□□ -1.39
LIMS1-214ENST00000542845 BBOX1O75936 387 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 SREBF2Q12772 1141 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 TTLL7Q6ZT98 887 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
LIMS1-214ENST00000542845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.39□□□□□ -1.39
LIMS1-214ENST00000542845 PPP1R42Q7Z4L9 355 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 GAS2L2Q8NHY3 880 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 CD99L2Q8TCZ2 262 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 MFRPQ9BY79 579 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 RBM27Q9P2N5 1060 aaKnown RBP6.39□□□□□ -1.39
LIMS1-214ENST00000542845 NSFL1CQ9UNZ2 370 aaKnown RBP6.39□□□□□ -1.39
LIMS1-214ENST00000542845 PTPN22Q9Y2R2 807 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 KNSTRNQ9Y448 316 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 UBN2Q6ZU65 1347 aa6.39□□□□□ -1.39
LIMS1-214ENST00000542845 ECE2O60344 883 aa6.38□□□□□ -1.39
LIMS1-214ENST00000542845 HCLS1P14317 486 aaPredicted RBP6.38□□□□□ -1.39
LIMS1-214ENST00000542845 FKBP1BP68106 108 aa6.38□□□□□ -1.39
LIMS1-214ENST00000542845 TCIRG1Q13488 830 aa6.38□□□□□ -1.39
LIMS1-214ENST00000542845 MCM10Q7L590 875 aa6.38□□□□□ -1.39
LIMS1-214ENST00000542845 RTF1Q92541 710 aaKnown RBP6.38□□□□□ -1.39
LIMS1-214ENST00000542845 MIS18AQ9NYP9 233 aa6.38□□□□□ -1.39
LIMS1-214ENST00000542845 MAP3K15Q6ZN16 1313 aa6.38□□□□□ -1.39
LIMS1-214ENST00000542845 RBBP6Q7Z6E9 1792 aaKnown RBP6.37□□□□□ -1.39
LIMS1-214ENST00000542845 RIC1Q4ADV7 1423 aa6.37□□□□□ -1.39
LIMS1-214ENST00000542845 WTIPA6NIX2 430 aaPredicted RBP6.37□□□□□ -1.39
LIMS1-214ENST00000542845 ERVV-1B6SEH8 477 aa6.37□□□□□ -1.39
LIMS1-214ENST00000542845 NTSR2O95665 410 aa6.37□□□□□ -1.39
LIMS1-214ENST00000542845 RPS12P25398 132 aaKnown RBP6.37□□□□□ -1.39
LIMS1-214ENST00000542845 MMRN1Q13201 1228 aa6.37□□□□□ -1.39
LIMS1-214ENST00000542845 DCTN1Q14203 1278 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms