RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
CLPB-211ENST00000542555 COG3Q96JB2 828 aa11.22□□□□□ -0.61
CLPB-211ENST00000542555 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
CLPB-211ENST00000542555 ADCY9O60503 1353 aa11.21□□□□□ -0.61
CLPB-211ENST00000542555 PTSQ03393 145 aa11.21□□□□□ -0.61
CLPB-211ENST00000542555 RIC3Q7Z5B4 369 aa11.21□□□□□ -0.61
CLPB-211ENST00000542555 GPR161Q8N6U8 529 aaKnown RBP11.21□□□□□ -0.61
CLPB-211ENST00000542555 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
CLPB-211ENST00000542555 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 TATP17735 454 aaPredicted RBP11.2□□□□□ -0.62
CLPB-211ENST00000542555 KRT76Q01546 638 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 CCDC116Q8IYX3 515 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 SVOPQ8N4V2 548 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
CLPB-211ENST00000542555 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 MAP4K5Q9Y4K4 846 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 LTN1O94822 1766 aa11.2□□□□□ -0.62
CLPB-211ENST00000542555 FAM208AQ9UK61 1670 aaKnown RBP11.2□□□□□ -0.62
CLPB-211ENST00000542555 SMG6Q86US8 1419 aaKnown RBP11.19□□□□□ -0.62
CLPB-211ENST00000542555 PER1O15534 1290 aaPredicted RBP11.19□□□□□ -0.62
CLPB-211ENST00000542555 MPRIPQ6WCQ1 1025 aa11.19□□□□□ -0.62
CLPB-211ENST00000542555 L3MBTL2Q969R5 705 aa11.19□□□□□ -0.62
CLPB-211ENST00000542555 LY75O60449 1722 aa11.18□□□□□ -0.62
CLPB-211ENST00000542555 MON2Q7Z3U7 1717 aa11.18□□□□□ -0.62
CLPB-211ENST00000542555 DOT1LQ8TEK3 1739 aa11.18□□□□□ -0.62
CLPB-211ENST00000542555 FIGNL2A6NMB9 653 aa11.18□□□□□ -0.62
CLPB-211ENST00000542555 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
CLPB-211ENST00000542555 PALLDQ8WX93 1383 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 HOXC9P31274 260 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 ARHGAP27Q6ZUM4 889 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
CLPB-211ENST00000542555 NSD2O96028 1365 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 UTRNP46939 3433 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 SSFA2P28290 1259 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 CARD11Q9BXL7 1154 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
CLPB-211ENST00000542555 MAP3K19Q56UN5 1328 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 USP54Q70EL1 1684 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 ZMYND10O75800 440 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 TGFB2P61812 414 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 NEUROD1Q13562 356 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
CLPB-211ENST00000542555 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
CLPB-211ENST00000542555 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.62
CLPB-211ENST00000542555 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
CLPB-211ENST00000542555 FSTL1Q12841 308 aa11.14□□□□□ -0.63
CLPB-211ENST00000542555 ZNF385CQ66K41 422 aaPredicted RBP11.14□□□□□ -0.63
CLPB-211ENST00000542555 DNAJC5GQ8N7S2 189 aa11.14□□□□□ -0.63
CLPB-211ENST00000542555 HELBQ8NG08 1087 aaPredicted RBP11.14□□□□□ -0.63
CLPB-211ENST00000542555 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
CLPB-211ENST00000542555 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
CLPB-211ENST00000542555 C5P01031 1676 aa11.14□□□□□ -0.63
CLPB-211ENST00000542555 MARSP56192 900 aaKnown RBP11.13□□□□□ -0.63
CLPB-211ENST00000542555 GPAT2Q6NUI2 795 aa11.13□□□□□ -0.63
CLPB-211ENST00000542555 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
CLPB-211ENST00000542555 RTL1A6NKG5 1358 aa11.13□□□□□ -0.63
CLPB-211ENST00000542555 CDC14CA4D256 554 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 IRS1P35568 1242 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 PPP1R26Q5T8A7 1209 aaPredicted RBP11.12□□□□□ -0.63
CLPB-211ENST00000542555 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 SH3BP5LQ7L8J4 393 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 NLGN1Q8N2Q7 840 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 USHBP1Q8N6Y0 703 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 CCDC87Q9NVE4 849 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 MEGF6O75095 1541 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 A0A1W2PP64 1363 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
CLPB-211ENST00000542555 MMP10P09238 476 aa11.11□□□□□ -0.63
CLPB-211ENST00000542555 VWA5B2Q8N398 1253 aa11.11□□□□□ -0.63
CLPB-211ENST00000542555 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
CLPB-211ENST00000542555 DNMT3AQ9Y6K1 912 aaPredicted RBP11.11□□□□□ -0.63
CLPB-211ENST00000542555 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 SPINT1O43278 529 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 IGHA1P01876 353 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 PRELPP51888 382 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 SIK1P57059 783 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 TMF1P82094 1093 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 CBLBQ13191 982 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 TRAPPC3LQ5T215 181 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 COL13A1Q5TAT6 717 aaPredicted RBP11.1□□□□□ -0.63
CLPB-211ENST00000542555 SV2AQ7L0J3 742 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 TMOD3Q9NYL9 352 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
CLPB-211ENST00000542555 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
CLPB-211ENST00000542555 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
CLPB-211ENST00000542555 A0A0G2JLW4 131 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms