RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MAP4K1Q92918 833 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 EAF2Q96CJ1 260 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 SUCLG2Q96I99 432 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 GDPD2Q9HCC8 539 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 PDRG1Q9NUG6 133 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 PA2G4Q9UQ80 394 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 SMC3Q9UQE7 1217 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 MTMR6Q9Y217 621 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 CNPY2Q9Y2B0 182 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 SCN11AQ9UI33 1791 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 C5P01031 1676 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 KIF1AQ12756 1690 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 ALS2Q96Q42 1657 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 MED23Q9ULK4 1368 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 PRAMEF22A3QJZ6 481 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 DDX58O95786 925 aaKnown RBP6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 IGKV5-2P06315 115 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 PDIA4P13667 645 aaKnown RBP6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 CPA1P15085 419 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 IER5LQ5T953 404 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 POTEAQ6S8J7 498 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 AACSQ86V21 672 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 JAKMIP1Q96N16 626 aaKnown RBP6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 FUCA2Q9BTY2 467 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 BICC1Q9H694 974 aaKnown RBP6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 AXIN2Q9Y2T1 843 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 ATP6V1DQ9Y5K8 247 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 CYP46A1Q9Y6A2 500 aa6.21□□□□□ -1.41
ATPAF1-212ENST00000542495 KDM6AO15550 1401 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 PHLPP1O60346 1717 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 KIF3CO14782 793 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 NMIQ13287 307 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 ME3Q16798 604 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 CSPP1Q1MSJ5 1256 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 TSGA10IPQ3SY00 556 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 CREB3L3Q68CJ9 461 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 PRPF40BQ6NWY9 871 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 LARP1Q6PKG0 1096 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 LRP10Q7Z4F1 713 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 PDCD7Q8N8D1 485 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 RNF214Q8ND24 703 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 ORAI2Q96SN7 254 aa6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 RBM8AQ9Y5S9 174 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-212ENST00000542495 COL18A1P39060 1754 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 RGPD5Q99666 1765 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 RFX7Q2KHR2 1363 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 ERBB3P21860 1342 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 A6NJR5 290 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 NEURL1BA8MQ27 555 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 SLC27A2O14975 620 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 ZKSCAN1P17029 563 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 GJB2P29033 226 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 IRX5P78411 483 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 G3BP1Q13283 466 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 TTLL12Q14166 644 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 USPL1Q5W0Q7 1092 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 ZNF790Q6PG37 636 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 CCDC83Q8IWF9 413 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 FAM227BQ96M60 508 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 C19orf44Q9H6X5 657 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 COPRSQ9NQ92 184 aa6.2□□□□□ -1.42
ATPAF1-212ENST00000542495 ELP1O95163 1332 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 SPATA31A6Q5VVP1 1343 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 GLI3P10071 1580 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 A0A0D9SFI3 127 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 ZBTB7CA1YPR0 619 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 C2orf72A6NCS6 295 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 ATF3P18847 181 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 PSMA5P28066 241 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 PTGER2P43116 358 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 RFX5P48382 616 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 MAP3K9P80192 1104 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 GCKRQ14397 625 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 RABL6Q3YEC7 729 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 METTL22Q9BUU2 404 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 SLC52A2Q9HAB3 445 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 TLR7Q9NYK1 1049 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 TPCN1Q9ULQ1 816 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 C1orf167Q5SNV9 1468 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 NPHP3Q7Z494 1330 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 PKD1L3Q7Z443 1732 aa6.19□□□□□ -1.42
ATPAF1-212ENST00000542495 TAF5LO75529 589 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 PHKG2P15735 406 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 ATP5JP18859 108 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 RPS6KB1P23443 525 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 XPCQ01831 940 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 DNM1Q05193 864 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 COL9A3Q14050 684 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 HSP90AA2PQ14568 343 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 ANKRD1Q15327 319 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 EPHA10Q5JZY3 1008 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 GIGYF2Q6Y7W6 1299 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 KRT28Q7Z3Y7 464 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 CCDC82Q8N4S0 544 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 CCDC8Q9H0W5 538 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 HMG20BQ9P0W2 317 aa6.18□□□□□ -1.42
ATPAF1-212ENST00000542495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms