RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 KRTAP4-12Q9BQ66 201 aa10.2□□□□□ -0.78
SRGAP1-204ENST00000542381 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
SRGAP1-204ENST00000542381 SOX18P35713 384 aa10.19□□□□□ -0.78
SRGAP1-204ENST00000542381 FSTP19883 344 aa10.18□□□□□ -0.78
SRGAP1-204ENST00000542381 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
SRGAP1-204ENST00000542381 AGGF1Q8N302 714 aaeCLIP10.18□□□□□ -0.78
SRGAP1-204ENST00000542381 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
SRGAP1-204ENST00000542381 OCLNQ16625 522 aa10.17□□□□□ -0.78
SRGAP1-204ENST00000542381 CAPN12Q6ZSI9 719 aa10.17□□□□□ -0.78
SRGAP1-204ENST00000542381 COL13A1Q5TAT6 717 aaPredicted RBP10.16□□□□□ -0.78
SRGAP1-204ENST00000542381 SRA1Q9HD15 236 aaKnown RBP10.16□□□□□ -0.78
SRGAP1-204ENST00000542381 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
SRGAP1-204ENST00000542381 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
SRGAP1-204ENST00000542381 BRD2P25440 801 aaKnown RBP10.15□□□□□ -0.78
SRGAP1-204ENST00000542381 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.78
SRGAP1-204ENST00000542381 SWI5Q1ZZU3 235 aa10.15□□□□□ -0.78
SRGAP1-204ENST00000542381 C16orf46Q6P387 395 aa10.15□□□□□ -0.78
SRGAP1-204ENST00000542381 Q6ZS46 218 aa10.15□□□□□ -0.78
SRGAP1-204ENST00000542381 UBAP1LF5GYI3 381 aa10.14□□□□□ -0.79
SRGAP1-204ENST00000542381 SSTR4P31391 388 aa10.14□□□□□ -0.79
SRGAP1-204ENST00000542381 MAP4K3Q8IVH8 894 aa10.14□□□□□ -0.79
SRGAP1-204ENST00000542381 GALNT11Q8NCW6 608 aa10.14□□□□□ -0.79
SRGAP1-204ENST00000542381 PPME1Q9Y570 386 aa10.14□□□□□ -0.79
SRGAP1-204ENST00000542381 TNFRSF10BO14763 440 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 GLB1P16278 677 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 ATP11AP98196 1134 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 OR13H1Q8NG92 308 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 STK32AQ8WU08 396 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 UBL7Q96S82 380 aaPredicted RBP10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 MKNK1Q9BUB5 465 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 PCMTD2Q9NV79 361 aa10.13□□□□□ -0.79
SRGAP1-204ENST00000542381 LINC01387J3KSC0 135 aa10.12□□□□□ -0.79
SRGAP1-204ENST00000542381 NAA30Q147X3 362 aaPredicted RBP10.12□□□□□ -0.79
SRGAP1-204ENST00000542381 LCE3BQ5TA77 95 aa10.12□□□□□ -0.79
SRGAP1-204ENST00000542381 TXNDC11Q6PKC3 985 aa10.12□□□□□ -0.79
SRGAP1-204ENST00000542381 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.12□□□□□ -0.79
SRGAP1-204ENST00000542381 LACRTQ9GZZ8 138 aa10.12□□□□□ -0.79
SRGAP1-204ENST00000542381 WISP1O95388 367 aa10.11□□□□□ -0.79
SRGAP1-204ENST00000542381 ADAMTSL4Q6UY14 1074 aa10.11□□□□□ -0.79
SRGAP1-204ENST00000542381 SLC51AQ86UW1 340 aa10.11□□□□□ -0.79
SRGAP1-204ENST00000542381 PIK3R5Q8WYR1 880 aa10.11□□□□□ -0.79
SRGAP1-204ENST00000542381 MUC3BQ9H195 1237 aa10.11□□□□□ -0.79
SRGAP1-204ENST00000542381 KCNK4Q9NYG8 393 aa10.11□□□□□ -0.79
SRGAP1-204ENST00000542381 CEP135Q66GS9 1140 aa10.1□□□□□ -0.79
SRGAP1-204ENST00000542381 DCAF11Q8TEB1 546 aa10.1□□□□□ -0.79
SRGAP1-204ENST00000542381 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
SRGAP1-204ENST00000542381 CDC25BP30305 580 aa10.09□□□□□ -0.79
SRGAP1-204ENST00000542381 HYAL2Q12891 473 aa10.09□□□□□ -0.79
SRGAP1-204ENST00000542381 CACTIN-AS1Q8N1I8 211 aa10.09□□□□□ -0.79
SRGAP1-204ENST00000542381 COL26A1Q96A83 441 aa10.09□□□□□ -0.79
SRGAP1-204ENST00000542381 TM4SF5O14894 197 aa10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 MED26O95402 600 aa10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 ZAP70P43403 619 aa10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 CD97P48960 835 aa10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 ELOAQ14241 798 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 RASSF4Q9H2L5 321 aa10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 CXXC1Q9P0U4 656 aaPredicted RBP10.08□□□□□ -0.8
SRGAP1-204ENST00000542381 ZBTB39O15060 712 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 CDC27P30260 824 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 CD68P34810 354 aaPredicted RBP10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 ARMC10Q8N2F6 343 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 GPR152Q8TDT2 470 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 SPACA7Q96KW9 195 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 CARD10Q9BWT7 1032 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 STOML1Q9UBI4 398 aa10.07□□□□□ -0.8
SRGAP1-204ENST00000542381 IGLV1-40P01703 118 aa10.06□□□□□ -0.8
SRGAP1-204ENST00000542381 SCNN1AP37088 669 aa10.06□□□□□ -0.8
SRGAP1-204ENST00000542381 MCTP1Q6DN14 999 aa10.06□□□□□ -0.8
SRGAP1-204ENST00000542381 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
SRGAP1-204ENST00000542381 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
SRGAP1-204ENST00000542381 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
SRGAP1-204ENST00000542381 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
SRGAP1-204ENST00000542381 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
SRGAP1-204ENST00000542381 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
SRGAP1-204ENST00000542381 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
SRGAP1-204ENST00000542381 FNDC3AQ9Y2H6 1198 aaKnown RBP10.05□□□□□ -0.8
SRGAP1-204ENST00000542381 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.04□□□□□ -0.8
SRGAP1-204ENST00000542381 TGFB1P01137 390 aa10.04□□□□□ -0.8
SRGAP1-204ENST00000542381 FSCN2O14926 492 aa10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 DDX3YO15523 660 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 KIF4AO95239 1232 aa10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 EPHA1P21709 976 aa10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 TMEM164Q5U3C3 297 aa10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 KIAA1211Q6ZU35 1233 aa10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 ABI2Q9NYB9 513 aaPredicted RBP10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 STIM2Q9P246 746 aa10.03□□□□□ -0.8
SRGAP1-204ENST00000542381 GSC2O15499 205 aa10.02□□□□□ -0.81
SRGAP1-204ENST00000542381 CEP120Q8N960 986 aa10.02□□□□□ -0.81
SRGAP1-204ENST00000542381 PBX4Q9BYU1 374 aa10.02□□□□□ -0.81
SRGAP1-204ENST00000542381 CEP41Q9BYV8 373 aa10.02□□□□□ -0.81
SRGAP1-204ENST00000542381 ADAM11O75078 769 aa10.01□□□□□ -0.81
SRGAP1-204ENST00000542381 DUOXA2Q1HG44 320 aa10.01□□□□□ -0.81
SRGAP1-204ENST00000542381 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
SRGAP1-204ENST00000542381 UTP4Q969X6 686 aaKnown RBP10.01□□□□□ -0.81
SRGAP1-204ENST00000542381 FAM46AQ96IP4 442 aaKnown RBP10.01□□□□□ -0.81
SRGAP1-204ENST00000542381 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
SRGAP1-204ENST00000542381 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms