RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZC3H12CQ9C0D7 883 aaKnown RBP20.91■□□□□ 0.94
CCND1-205ENST00000542367 CREBZFQ9NS37 354 aa20.91■□□□□ 0.94
CCND1-205ENST00000542367 GGA1Q9UJY5 639 aa20.91■□□□□ 0.94
CCND1-205ENST00000542367 MYH3P11055 1940 aa20.9■□□□□ 0.94
CCND1-205ENST00000542367 UFL1O94874 794 aa20.9■□□□□ 0.94
CCND1-205ENST00000542367 JMYQ8N9B5 988 aa20.9■□□□□ 0.94
CCND1-205ENST00000542367 PLA2G12BQ9BX93 195 aa20.9■□□□□ 0.94
CCND1-205ENST00000542367 ADARB2Q9NS39 739 aaKnown RBP20.9■□□□□ 0.94
CCND1-205ENST00000542367 ECE2O60344 883 aa20.89■□□□□ 0.93
CCND1-205ENST00000542367 BEND3Q5T5X7 828 aa20.89■□□□□ 0.93
CCND1-205ENST00000542367 BSDC1Q9NW68 430 aaPredicted RBP20.89■□□□□ 0.93
CCND1-205ENST00000542367 RTL9Q8NET4 1388 aa20.88■□□□□ 0.93
CCND1-205ENST00000542367 XDHP47989 1333 aa20.88■□□□□ 0.93
CCND1-205ENST00000542367 E9PSI1 815 aa20.88■□□□□ 0.93
CCND1-205ENST00000542367 CCER2I3L3R5 266 aa20.88■□□□□ 0.93
CCND1-205ENST00000542367 PSMD14O00487 310 aa20.88■□□□□ 0.93
CCND1-205ENST00000542367 KCNQ5Q9NR82 932 aa20.88■□□□□ 0.93
CCND1-205ENST00000542367 ZBTB12Q9Y330 459 aaPredicted RBP20.88■□□□□ 0.93
CCND1-205ENST00000542367 G3V3G9 751 aa20.87■□□□□ 0.93
CCND1-205ENST00000542367 CSF1RP07333 972 aa20.87■□□□□ 0.93
CCND1-205ENST00000542367 ATP2B4P23634 1241 aa20.87■□□□□ 0.93
CCND1-205ENST00000542367 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
CCND1-205ENST00000542367 CNOT7Q9UIV1 285 aaKnown RBP20.87■□□□□ 0.93
CCND1-205ENST00000542367 MINPP1Q9UNW1 487 aa20.87■□□□□ 0.93
CCND1-205ENST00000542367 PCNTO95613 3336 aa20.86■□□□□ 0.93
CCND1-205ENST00000542367 TMEM88BA6NKF7 163 aa20.86■□□□□ 0.93
CCND1-205ENST00000542367 ITGA6P23229 1130 aa20.86■□□□□ 0.93
CCND1-205ENST00000542367 SLFN5Q08AF3 891 aa20.86■□□□□ 0.93
CCND1-205ENST00000542367 SHTN1A0MZ66 631 aa20.85■□□□□ 0.93
CCND1-205ENST00000542367 H7C1D1 291 aa20.85■□□□□ 0.93
CCND1-205ENST00000542367 IGHMBP2P38935 993 aaKnown RBP20.85■□□□□ 0.93
CCND1-205ENST00000542367 FAM161AQ3B820 660 aa20.85■□□□□ 0.93
CCND1-205ENST00000542367 SLC4A10Q6U841 1118 aa20.85■□□□□ 0.93
CCND1-205ENST00000542367 DPF2Q92785 391 aa20.85■□□□□ 0.93
CCND1-205ENST00000542367 MKRN1Q9UHC7 482 aaKnown RBP20.85■□□□□ 0.93
CCND1-205ENST00000542367 WTIPA6NIX2 430 aaPredicted RBP20.84■□□□□ 0.93
CCND1-205ENST00000542367 MICALL2Q8IY33 904 aa20.84■□□□□ 0.93
CCND1-205ENST00000542367 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
CCND1-205ENST00000542367 HIRAP54198 1017 aaPredicted RBP20.83■□□□□ 0.93
CCND1-205ENST00000542367 FOXO4P98177 505 aa20.83■□□□□ 0.93
CCND1-205ENST00000542367 FMR1Q06787 632 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCND1-205ENST00000542367 MRPL50Q8N5N7 158 aaKnown RBP20.83■□□□□ 0.93
CCND1-205ENST00000542367 TRPM4Q8TD43 1214 aa20.83■□□□□ 0.93
CCND1-205ENST00000542367 SPEF2Q9C093 1822 aa20.83■□□□□ 0.92
CCND1-205ENST00000542367 GRM8O00222 908 aa20.82■□□□□ 0.92
CCND1-205ENST00000542367 CCT4P50991 539 aaKnown RBP20.82■□□□□ 0.92
CCND1-205ENST00000542367 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
CCND1-205ENST00000542367 C9orf78Q9NZ63 289 aaPredicted RBP20.82■□□□□ 0.92
CCND1-205ENST00000542367 PGAP2Q9UHJ9 254 aa20.82■□□□□ 0.92
CCND1-205ENST00000542367 ANKRD18BA2A2Z9 1011 aa20.81■□□□□ 0.92
CCND1-205ENST00000542367 ALDH1L1O75891 902 aa20.81■□□□□ 0.92
CCND1-205ENST00000542367 VIL1P09327 827 aaKnown RBP20.81■□□□□ 0.92
CCND1-205ENST00000542367 RPS12P25398 132 aaKnown RBP20.81■□□□□ 0.92
CCND1-205ENST00000542367 SAMD7Q7Z3H4 446 aa20.81■□□□□ 0.92
CCND1-205ENST00000542367 ZC3H15Q8WU90 426 aaKnown RBP20.81■□□□□ 0.92
CCND1-205ENST00000542367 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
CCND1-205ENST00000542367 SCN9AQ15858 1988 aa20.81■□□□□ 0.92
CCND1-205ENST00000542367 TRAF5O00463 557 aa20.8■□□□□ 0.92
CCND1-205ENST00000542367 SSH1Q8WYL5 1049 aa20.8■□□□□ 0.92
CCND1-205ENST00000542367 CHMP3Q9Y3E7 222 aa20.8■□□□□ 0.92
CCND1-205ENST00000542367 CNTNAP1P78357 1384 aa20.8■□□□□ 0.92
CCND1-205ENST00000542367 IFIT5Q13325 482 aaKnown RBP20.79■□□□□ 0.92
CCND1-205ENST00000542367 EPHA10Q5JZY3 1008 aa20.79■□□□□ 0.92
CCND1-205ENST00000542367 LMBR1LQ6UX01 489 aa20.79■□□□□ 0.92
CCND1-205ENST00000542367 PODNQ7Z5L7 613 aa20.79■□□□□ 0.92
CCND1-205ENST00000542367 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
CCND1-205ENST00000542367 ANKRD2Q9GZV1 360 aa20.79■□□□□ 0.92
CCND1-205ENST00000542367 LEMD3Q9Y2U8 911 aa20.79■□□□□ 0.92
CCND1-205ENST00000542367 MED23Q9ULK4 1368 aa20.78■□□□□ 0.92
CCND1-205ENST00000542367 TBC1D10BQ4KMP7 808 aaPredicted RBP20.78■□□□□ 0.92
CCND1-205ENST00000542367 RBM26Q5T8P6 1007 aaKnown RBP20.78■□□□□ 0.92
CCND1-205ENST00000542367 GLIS2Q9BZE0 524 aaPredicted RBP20.78■□□□□ 0.92
CCND1-205ENST00000542367 PTPRCP08575 1304 aa20.78■□□□□ 0.92
CCND1-205ENST00000542367 EGFRP00533 1210 aa20.77■□□□□ 0.92
CCND1-205ENST00000542367 CHRNDQ07001 517 aa20.77■□□□□ 0.92
CCND1-205ENST00000542367 CST9Q5W186 159 aa20.77■□□□□ 0.92
CCND1-205ENST00000542367 RSBN1LQ6PCB5 846 aaPredicted RBP20.77■□□□□ 0.92
CCND1-205ENST00000542367 TXNRD3Q86VQ6 643 aa20.77■□□□□ 0.92
CCND1-205ENST00000542367 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
CCND1-205ENST00000542367 ZNF804BA4D1E1 1349 aa20.77■□□□□ 0.91
CCND1-205ENST00000542367 USP17L3A6NCW0 530 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 USP17L4A6NCW7 530 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 RASSF10A6NK89 507 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 VEGFBP49765 207 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 DEFB115Q30KQ5 88 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 USP17L1Q7RTZ2 530 aa20.76■□□□□ 0.91
CCND1-205ENST00000542367 NBPF7P0C2Y1 421 aaPredicted RBP20.75■□□□□ 0.91
CCND1-205ENST00000542367 HSPA1AP0DMV8 641 aaKnown RBP20.75■□□□□ 0.91
CCND1-205ENST00000542367 HSPA1BP0DMV9 641 aaKnown RBP20.75■□□□□ 0.91
CCND1-205ENST00000542367 CCDC57Q2TAC2 916 aa20.75■□□□□ 0.91
CCND1-205ENST00000542367 ALDH1L2Q3SY69 923 aa20.75■□□□□ 0.91
CCND1-205ENST00000542367 AGBL3Q8NEM8 1001 aa20.75■□□□□ 0.91
CCND1-205ENST00000542367 ZNF594Q96JF6 807 aaPredicted RBP20.75■□□□□ 0.91
CCND1-205ENST00000542367 KCNJ4P48050 445 aa20.74■□□□□ 0.91
CCND1-205ENST00000542367 TAF7LQ5H9L4 462 aa20.74■□□□□ 0.91
CCND1-205ENST00000542367 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
CCND1-205ENST00000542367 SUCLG2Q96I99 432 aa20.74■□□□□ 0.91
CCND1-205ENST00000542367 TRPM7Q96QT4 1865 aa20.74■□□□□ 0.91
CCND1-205ENST00000542367 COA1Q9GZY4 146 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms