RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 BCL2L12Q9HB09 334 aa20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 TAF5LO75529 589 aa20.79■□□□□ 0.92
TMEM50B-210ENST00000542230 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
TMEM50B-210ENST00000542230 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
TMEM50B-210ENST00000542230 CASTP20810 708 aaKnown RBP20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 RAB3GAP1Q15042 981 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 ATP2B3Q16720 1220 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 CREB3L3Q68CJ9 461 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 COL4A1P02462 1669 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 CICQ96RK0 1608 aaPredicted RBP20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 GNPATO15228 680 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 MCM4P33991 863 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 KCNJ4P48050 445 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 FBXO3Q9UK99 471 aa20.78■□□□□ 0.92
TMEM50B-210ENST00000542230 USPL1Q5W0Q7 1092 aa20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 TBC1D9BQ66K14 1250 aa20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 CCDC24Q8N4L8 307 aa20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 TTC14Q96N46 770 aa20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 QTRT2Q9H974 415 aaKnown RBP20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 AKAP2Q9Y2D5 859 aa20.77■□□□□ 0.92
TMEM50B-210ENST00000542230 SLC27A2O14975 620 aa20.77■□□□□ 0.91
TMEM50B-210ENST00000542230 ERFEQ4G0M1 354 aa20.77■□□□□ 0.91
TMEM50B-210ENST00000542230 PARP10Q53GL7 1025 aa20.77■□□□□ 0.91
TMEM50B-210ENST00000542230 TTC39AQ5SRH9 613 aa20.77■□□□□ 0.91
TMEM50B-210ENST00000542230 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
TMEM50B-210ENST00000542230 VPS53Q5VIR6 699 aa20.76■□□□□ 0.91
TMEM50B-210ENST00000542230 TRPC5Q9UL62 973 aaPredicted RBP20.76■□□□□ 0.91
TMEM50B-210ENST00000542230 CIZ1Q9ULV3 898 aaPredicted RBP20.76■□□□□ 0.91
TMEM50B-210ENST00000542230 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
TMEM50B-210ENST00000542230 ATRNO75882 1429 aa20.76■□□□□ 0.91
TMEM50B-210ENST00000542230 ZAP70P43403 619 aa20.75■□□□□ 0.91
TMEM50B-210ENST00000542230 AK2P54819 239 aa20.75■□□□□ 0.91
TMEM50B-210ENST00000542230 KCNB2Q92953 911 aa20.75■□□□□ 0.91
TMEM50B-210ENST00000542230 PDE8BO95263 885 aa20.75■□□□□ 0.91
TMEM50B-210ENST00000542230 CCDC158Q5M9N0 1113 aa20.75■□□□□ 0.91
TMEM50B-210ENST00000542230 WTIPA6NIX2 430 aaPredicted RBP20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 RUFY3Q7L099 469 aa20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 TCEANC2Q96MN5 208 aa20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 DDX60Q8IY21 1712 aaKnown RBP20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 A0A0G2JLW4 131 aa20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 MCAMP43121 646 aa20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 CHAMP1Q96JM3 812 aa20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
TMEM50B-210ENST00000542230 MCMDC2Q4G0Z9 681 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 NHSQ6T4R5 1651 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 RPS6KA4O75676 772 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 PHF14O94880 888 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 LARGE1O95461 756 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 PHKA1P46020 1223 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 CLEC4GQ6UXB4 293 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 ZNF652Q9Y2D9 606 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 ZDHHC9Q9Y397 364 aa20.73■□□□□ 0.91
TMEM50B-210ENST00000542230 TAF1P21675 1872 aa20.72■□□□□ 0.91
TMEM50B-210ENST00000542230 CUL4AQ13619 759 aa20.72■□□□□ 0.91
TMEM50B-210ENST00000542230 FOXD4L5Q5VV16 416 aaPredicted RBP20.72■□□□□ 0.91
TMEM50B-210ENST00000542230 FOXD4L4Q8WXT5 416 aaPredicted RBP20.72■□□□□ 0.91
TMEM50B-210ENST00000542230 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
TMEM50B-210ENST00000542230 OSBP2Q969R2 916 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 AK7Q96M32 723 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 ZSWIM6Q9HCJ5 1215 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 BCORQ6W2J9 1755 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 SBF2Q86WG5 1849 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 M0R2C6 588 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 CCDC152Q4G0S7 254 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 ZMYM1Q5SVZ6 1142 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 MPHOSPH8Q99549 860 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 ZNF831Q5JPB2 1677 aa20.71■□□□□ 0.91
TMEM50B-210ENST00000542230 RNF113AO15541 343 aaKnown RBP20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 MCM2P49736 904 aa20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 NARFQ9UHQ1 456 aa20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 ZKSCAN1P17029 563 aaPredicted RBP20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 FGFR2P21802 821 aa20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 PDRG1Q9NUG6 133 aa20.7■□□□□ 0.9
TMEM50B-210ENST00000542230 MAST3O60307 1309 aa20.69■□□□□ 0.9
TMEM50B-210ENST00000542230 ABCC12Q96J65 1359 aa20.69■□□□□ 0.9
TMEM50B-210ENST00000542230 CYP2E1P05181 493 aaPredicted RBP20.69■□□□□ 0.9
TMEM50B-210ENST00000542230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.69■□□□□ 0.9
TMEM50B-210ENST00000542230 RFX7Q2KHR2 1363 aa20.69■□□□□ 0.9
TMEM50B-210ENST00000542230 GOLGB1Q14789 3259 aaKnown RBP20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 FAM196AQ6ZSG2 479 aa20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 RTCBQ9Y3I0 505 aaKnown RBP20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 SPEF2Q9C093 1822 aa20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 AKAP11Q9UKA4 1901 aa20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 CYP21A2P08686 494 aa20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 CYP46A1Q9Y6A2 500 aa20.68■□□□□ 0.9
TMEM50B-210ENST00000542230 PUM3Q15397 648 aaKnown RBP20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 LRP5O75197 1615 aa20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 MROH5Q6ZUA9 1318 aa20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 ZPR1O75312 459 aa20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 TM6SF1Q9BZW5 370 aa20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 PIH1D3Q9NQM4 214 aaKnown RBP20.67■□□□□ 0.9
TMEM50B-210ENST00000542230 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
TMEM50B-210ENST00000542230 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
TMEM50B-210ENST00000542230 LPIN2Q92539 896 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms