RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ZNF609O15014 1411 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 MPHOSPH8Q99549 860 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 GZF1Q9H116 711 aaPredicted RBP10.56□□□□□ -0.72
THBS3-210ENST00000541576 A0A1B0GUL7 405 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 IGHMBP2P38935 993 aaKnown RBP10.56□□□□□ -0.72
THBS3-210ENST00000541576 TIMM10P62072 90 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 LRP5O75197 1615 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 CNBD1Q8NA66 436 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 CDC5LQ99459 802 aaKnown RBP10.56□□□□□ -0.72
THBS3-210ENST00000541576 BOLA2Q9H3K6 86 aa10.56□□□□□ -0.72
THBS3-210ENST00000541576 ATP5JP18859 108 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 CHMLP26374 656 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
THBS3-210ENST00000541576 CCDC24Q8N4L8 307 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 AK9Q5TCS8 1911 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 MROH5Q6ZUA9 1318 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 CAMKK2Q96RR4 588 aa10.55□□□□□ -0.72
THBS3-210ENST00000541576 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
THBS3-210ENST00000541576 EZH2Q15910 746 aaKnown RBP10.54□□□□□ -0.72
THBS3-210ENST00000541576 COL23A1Q86Y22 540 aaPredicted RBP10.54□□□□□ -0.72
THBS3-210ENST00000541576 EVI5LQ96CN4 794 aa10.54□□□□□ -0.72
THBS3-210ENST00000541576 TM4SF1P30408 202 aa10.54□□□□□ -0.72
THBS3-210ENST00000541576 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
THBS3-210ENST00000541576 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
THBS3-210ENST00000541576 PDE8BO95263 885 aa10.54□□□□□ -0.72
THBS3-210ENST00000541576 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
THBS3-210ENST00000541576 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
THBS3-210ENST00000541576 SERPINB2P05120 415 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 GORABQ5T7V8 394 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 PRR5LQ6MZQ0 368 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 XAGE2Q96GT9 111 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 IL25Q9H293 177 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 BAG6P46379 1132 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 ESYT1Q9BSJ8 1104 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 USP26Q9BXU7 913 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 PNPLA7Q6ZV29 1317 aa10.53□□□□□ -0.72
THBS3-210ENST00000541576 REC8O95072 547 aa10.52□□□□□ -0.72
THBS3-210ENST00000541576 ADORA1P30542 326 aa10.52□□□□□ -0.72
THBS3-210ENST00000541576 ST5P78524 1137 aa10.52□□□□□ -0.72
THBS3-210ENST00000541576 DDR1Q08345 913 aa10.52□□□□□ -0.72
THBS3-210ENST00000541576 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.72
THBS3-210ENST00000541576 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.72
THBS3-210ENST00000541576 HELBQ8NG08 1087 aaPredicted RBP10.52□□□□□ -0.72
THBS3-210ENST00000541576 SPEF2Q9C093 1822 aa10.52□□□□□ -0.73
THBS3-210ENST00000541576 EDC3Q96F86 508 aaKnown RBP10.52□□□□□ -0.73
THBS3-210ENST00000541576 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
THBS3-210ENST00000541576 HAUS7Q99871 368 aa10.52□□□□□ -0.73
THBS3-210ENST00000541576 NDUFB9Q9Y6M9 179 aa10.52□□□□□ -0.73
THBS3-210ENST00000541576 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
THBS3-210ENST00000541576 DDX46Q7L014 1031 aaKnown RBP10.52□□□□□ -0.73
THBS3-210ENST00000541576 CELF1Q92879 486 aaKnown RBP10.52□□□□□ -0.73
THBS3-210ENST00000541576 KIF2CQ99661 725 aa10.52□□□□□ -0.73
THBS3-210ENST00000541576 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
THBS3-210ENST00000541576 BSDC1Q9NW68 430 aaPredicted RBP10.52□□□□□ -0.73
THBS3-210ENST00000541576 SLC15A2Q16348 729 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 LPIN2Q92539 896 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 FSD1Q9BTV5 496 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 STK32BQ9NY57 414 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 TAF1P21675 1872 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 COL4A1P02462 1669 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
THBS3-210ENST00000541576 TAF5LO75529 589 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 IFIT1P09914 478 aaKnown RBP10.51□□□□□ -0.73
THBS3-210ENST00000541576 CHRNDQ07001 517 aa10.51□□□□□ -0.73
THBS3-210ENST00000541576 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.51□□□□□ -0.73
THBS3-210ENST00000541576 HIP1O00291 1037 aa10.5□□□□□ -0.73
THBS3-210ENST00000541576 FGFR2P21802 821 aa10.5□□□□□ -0.73
THBS3-210ENST00000541576 RPS8P62241 208 aaKnown RBP10.5□□□□□ -0.73
THBS3-210ENST00000541576 DEFB132Q7Z7B7 95 aa10.5□□□□□ -0.73
THBS3-210ENST00000541576 SLC5A1P13866 664 aa10.5□□□□□ -0.73
THBS3-210ENST00000541576 CWC27Q6UX04 472 aaKnown RBP10.5□□□□□ -0.73
THBS3-210ENST00000541576 RUFY2Q8WXA3 655 aa10.5□□□□□ -0.73
THBS3-210ENST00000541576 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
THBS3-210ENST00000541576 PAG1Q9NWQ8 432 aa10.49□□□□□ -0.73
THBS3-210ENST00000541576 SNAP23O00161 211 aa10.49□□□□□ -0.73
THBS3-210ENST00000541576 GOLIM4O00461 696 aa10.49□□□□□ -0.73
THBS3-210ENST00000541576 SGSM2O43147 1006 aa10.49□□□□□ -0.73
THBS3-210ENST00000541576 ILDR1Q86SU0 546 aaPredicted RBP10.49□□□□□ -0.73
THBS3-210ENST00000541576 RPGRQ92834 1020 aaKnown RBP10.49□□□□□ -0.73
THBS3-210ENST00000541576 MINPP1Q9UNW1 487 aa10.49□□□□□ -0.73
THBS3-210ENST00000541576 MMP10P09238 476 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 CRY2Q49AN0 593 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 RFX7Q2KHR2 1363 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 FKBP4Q02790 459 aaKnown RBP eCLIP10.48□□□□□ -0.73
THBS3-210ENST00000541576 GRAPQ13588 217 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 CCDC102BQ68D86 513 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 MSL1Q68DK7 614 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 KBTBD3Q8NAB2 608 aa10.48□□□□□ -0.73
THBS3-210ENST00000541576 GRAPLQ8TC17 118 aaPredicted RBP10.48□□□□□ -0.73
THBS3-210ENST00000541576 ZNF512BQ96KM6 892 aaPredicted RBP10.48□□□□□ -0.73
THBS3-210ENST00000541576 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
THBS3-210ENST00000541576 PARP3Q9Y6F1 533 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms