RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 GPTP24298 496 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 NEK4P51957 841 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 TMX3Q96JJ7 454 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 ZDHHC9Q9Y397 364 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 DBNDD2Q9BQY9 259 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 TM6SF1Q9BZW5 370 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
SPOCK3-226ENST00000541354 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 C4AP0C0L4 1744 aa17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 A0A0G2JS52 829 aa17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 LRRC24Q50LG9 513 aa17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 ZNF772Q68DY9 489 aaPredicted RBP17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 KBTBD3Q8NAB2 608 aa17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 CCNL1Q9UK58 526 aaPredicted RBP17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 PALD1Q9ULE6 856 aa17.61■□□□□ 0.41
SPOCK3-226ENST00000541354 RGPD3A6NKT7 1758 aaPredicted RBP17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 RGPD4Q7Z3J3 1758 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 A0A1B0GUL7 405 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 ARXQ96QS3 562 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 FSD1Q9BTV5 496 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 VGLL2Q8N8G2 317 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 BOLA2Q9H3K6 86 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 BRWD3Q6RI45 1802 aa17.6■□□□□ 0.41
SPOCK3-226ENST00000541354 ZNF445P59923 1031 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 GREM2Q9H772 168 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 ZFYP08048 801 aaPredicted RBP17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 CCDC171Q6TFL3 1326 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 CASZ1Q86V15 1759 aa17.59■□□□□ 0.41
SPOCK3-226ENST00000541354 TSGA10IPQ3SY00 556 aa17.58■□□□□ 0.41
SPOCK3-226ENST00000541354 LDHAL6AQ6ZMR3 332 aa17.58■□□□□ 0.41
SPOCK3-226ENST00000541354 MAP4K1Q92918 833 aa17.58■□□□□ 0.41
SPOCK3-226ENST00000541354 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.41
SPOCK3-226ENST00000541354 PANK2Q9BZ23 570 aa17.58■□□□□ 0.4
SPOCK3-226ENST00000541354 BRD1O95696 1058 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 PKP1Q13835 747 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 UBR3Q6ZT12 1888 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 PDE8BO95263 885 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 MAP4K4O95819 1239 aaPredicted RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 ATP2B3Q16720 1220 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 IL25Q9H293 177 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 PAG1Q9NWQ8 432 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 DDX49Q9Y6V7 483 aaKnown RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 ALDH8A1Q9H2A2 487 aaPredicted RBP17.57■□□□□ 0.4
SPOCK3-226ENST00000541354 PUM3Q15397 648 aaKnown RBP17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 CNNM1Q9NRU3 951 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 IFIT1P09914 478 aaKnown RBP17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 FGFR2P21802 821 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 KRT27Q7Z3Y8 459 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 LPIN2Q92539 896 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 NEUROD6Q96NK8 337 aa17.56■□□□□ 0.4
SPOCK3-226ENST00000541354 MYH7P12883 1935 aa17.55■□□□□ 0.4
SPOCK3-226ENST00000541354 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
SPOCK3-226ENST00000541354 NECTIN1Q15223 517 aa17.55■□□□□ 0.4
SPOCK3-226ENST00000541354 TTF1Q15361 905 aaPredicted RBP17.55■□□□□ 0.4
SPOCK3-226ENST00000541354 IGSF3O75054 1194 aa17.55■□□□□ 0.4
SPOCK3-226ENST00000541354 ZPR1O75312 459 aa17.55■□□□□ 0.4
SPOCK3-226ENST00000541354 ARID4AP29374 1257 aaPredicted RBP17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 MCMDC2Q4G0Z9 681 aa17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 TTC39AQ5SRH9 613 aa17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 TTC14Q96N46 770 aa17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
SPOCK3-226ENST00000541354 PSMA5P28066 241 aa17.53■□□□□ 0.4
SPOCK3-226ENST00000541354 TIMM10P62072 90 aa17.53■□□□□ 0.4
SPOCK3-226ENST00000541354 KRT32Q14532 448 aa17.53■□□□□ 0.4
SPOCK3-226ENST00000541354 AKAP11Q9UKA4 1901 aa17.53■□□□□ 0.4
SPOCK3-226ENST00000541354 ZMYM1Q5SVZ6 1142 aa17.53■□□□□ 0.4
SPOCK3-226ENST00000541354 DOCK2Q92608 1830 aa17.53■□□□□ 0.4
SPOCK3-226ENST00000541354 SLC5A1P13866 664 aa17.52■□□□□ 0.4
SPOCK3-226ENST00000541354 GORABQ5T7V8 394 aa17.52■□□□□ 0.4
SPOCK3-226ENST00000541354 TMED8Q6PL24 325 aaPredicted RBP17.52■□□□□ 0.4
SPOCK3-226ENST00000541354 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
SPOCK3-226ENST00000541354 DSCC1Q9BVC3 393 aa17.52■□□□□ 0.4
SPOCK3-226ENST00000541354 GNPATO15228 680 aa17.52■□□□□ 0.4
SPOCK3-226ENST00000541354 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms