RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 CROCC2H7BZ55 1655 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 ADORA1P30542 326 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 CCDC96Q2M329 555 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 EPHA10Q5JZY3 1008 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 RNF113AO15541 343 aaKnown RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 HSP90AA4PQ58FG1 418 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 NCOA7Q8NI08 942 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 SSH3Q8TE77 659 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
TTC39C-203ENST00000540918 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 PTH1RQ03431 593 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 HLFQ16534 295 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 CTCFLQ8NI51 663 aaPredicted RBP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 MCM9Q9NXL9 1143 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 SAP30BPQ9UHR5 308 aaKnown RBP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 hCG_1642624A0A1W2PR95 340 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 METAP2P50579 478 aaKnown RBP eCLIP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 KLHL10Q6JEL2 608 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 A0A0D9SFI3 127 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 PRC1O43663 620 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 PDE8AO60658 829 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 IARSP41252 1262 aaKnown RBP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 BCAMP50895 628 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 EIF6P56537 245 aaKnown RBP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 TTF1Q15361 905 aaPredicted RBP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 NUP62CLQ9H1M0 184 aa11.17□□□□□ -0.62
TTC39C-203ENST00000540918 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
TTC39C-203ENST00000540918 B4E1Z4 1266 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 UQCRFS1P1P0C7P4 283 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 GIMAP6Q6P9H5 292 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 ADGRB3O60242 1522 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 TTC41PQ6P2S7 1318 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 MARCKSP29966 332 aaPredicted RBP11.16□□□□□ -0.62
TTC39C-203ENST00000540918 MCM5P33992 734 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 UFL1O94874 794 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 FAM196AQ6ZSG2 479 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 UIMC1Q96RL1 719 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
TTC39C-203ENST00000540918 BABAM1Q9NWV8 329 aa11.16□□□□□ -0.62
TTC39C-203ENST00000540918 SGSM2O43147 1006 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
TTC39C-203ENST00000540918 CHMP4BP1P59074 171 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 PKP1Q13835 747 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 OLFM4Q6UX06 510 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 ADAMTS13Q76LX8 1427 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 CDKL5O76039 1030 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
TTC39C-203ENST00000540918 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
TTC39C-203ENST00000540918 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 DBNLQ9UJU6 430 aaKnown RBP11.15□□□□□ -0.62
TTC39C-203ENST00000540918 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
TTC39C-203ENST00000540918 GPAA1O43292 621 aa11.15□□□□□ -0.63
TTC39C-203ENST00000540918 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.63
TTC39C-203ENST00000540918 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 CCDC192P0DO97 292 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 HOOK1Q9UJC3 728 aaKnown RBP11.14□□□□□ -0.63
TTC39C-203ENST00000540918 CPS1P31327 1500 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 KRT18P05783 430 aaKnown RBP11.14□□□□□ -0.63
TTC39C-203ENST00000540918 NLRP5P59047 1200 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 CTDSPL2Q05D32 466 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 WTAPQ15007 396 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
TTC39C-203ENST00000540918 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 PTPRMP28827 1452 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 WDR78Q5VTH9 848 aa11.14□□□□□ -0.63
TTC39C-203ENST00000540918 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
TTC39C-203ENST00000540918 ZBTB43O43298 467 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 TSR1Q2NL82 804 aaKnown RBP11.13□□□□□ -0.63
TTC39C-203ENST00000540918 CATIPQ7Z7H3 387 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
TTC39C-203ENST00000540918 PARP3Q9Y6F1 533 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 SLC27A2O14975 620 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 BAG3O95817 575 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 SERPINC1P01008 464 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
TTC39C-203ENST00000540918 PHKA1P46020 1223 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 SSRP1Q08945 709 aaKnown RBP11.13□□□□□ -0.63
TTC39C-203ENST00000540918 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 ARHGEF40Q8TER5 1519 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 IBSPP21815 317 aaPredicted RBP11.13□□□□□ -0.63
TTC39C-203ENST00000540918 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 FSIP1Q8NA03 581 aa11.13□□□□□ -0.63
TTC39C-203ENST00000540918 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
TTC39C-203ENST00000540918 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
TTC39C-203ENST00000540918 CTSWP56202 376 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 SDR42E1Q8WUS8 393 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms