RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TNRC6CQ9HCJ0 1690 aaKnown RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 C4AP0C0L4 1744 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 ERVV-2B6SEH9 535 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 POLRMTO00411 1230 aaKnown RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 PPEF1O14829 653 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 LILRB3O75022 631 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 TM4SF1P30408 202 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 MLLT1Q03111 559 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 MTMR2Q13614 643 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 ZNF697Q5TEC3 545 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 BRICD5Q6PL45 260 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 TREML4Q6UXN2 200 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 ZNF598Q86UK7 904 aaKnown RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 GGNBP2Q9H3C7 697 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 USP42Q9H9J4 1324 aaKnown RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 MAP2P11137 1827 aaKnown RBP6.43□□□□□ -1.38
SNHG1-214ENST00000540865 TONSLQ96HA7 1378 aa6.43□□□□□ -1.38
SNHG1-214ENST00000540865 N4BP2Q86UW6 1770 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-214ENST00000540865 NFKBIEO00221 500 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 FMNL1O95466 1100 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-214ENST00000540865 GJA5P36382 358 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 VEGFBP49765 207 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 LBX1P52954 281 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 Q3C1V9 767 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 TTLL6Q8N841 843 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 SPSB2Q99619 263 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 ZBTB3Q9H5J0 574 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 PRDM9Q9NQV7 894 aa6.42□□□□□ -1.38
SNHG1-214ENST00000540865 SRP68Q9UHB9 627 aaKnown RBP6.42□□□□□ -1.38
SNHG1-214ENST00000540865 CFAP99D6REC4 459 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 S1PR4O95977 384 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 HSP90AB1P08238 724 aaKnown RBP6.41□□□□□ -1.38
SNHG1-214ENST00000540865 HSPA8P11142 646 aaKnown RBP6.41□□□□□ -1.38
SNHG1-214ENST00000540865 CRKLP46109 303 aaKnown RBP6.41□□□□□ -1.38
SNHG1-214ENST00000540865 TUSC1Q2TAM9 212 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 LIAT1Q6ZQX7 453 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 FAM160A2Q8N612 972 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-214ENST00000540865 TSC1Q92574 1164 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 TESK2Q96S53 571 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 SIN3AQ96ST3 1273 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 WASHC2AQ641Q2 1341 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 PASKQ96RG2 1323 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 PKD1L3Q7Z443 1732 aa6.41□□□□□ -1.38
SNHG1-214ENST00000540865 TMEM88BA6NKF7 163 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 RFC5P40937 340 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 MAP2K1Q02750 393 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-214ENST00000540865 NEUROD1Q13562 356 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 PRPF38BQ5VTL8 546 aaKnown RBP6.4□□□□□ -1.38
SNHG1-214ENST00000540865 LDHDQ86WU2 507 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 ANKLE1Q8NAG6 615 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 PRR7Q8TB68 274 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 USB1Q9BQ65 265 aaKnown RBP6.4□□□□□ -1.38
SNHG1-214ENST00000540865 AAASQ9NRG9 546 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 EMILIN1Q9Y6C2 1016 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 ARFGEF1Q9Y6D6 1849 aa6.4□□□□□ -1.38
SNHG1-214ENST00000540865 BRCA1P38398 1863 aaKnown RBP6.39□□□□□ -1.39
SNHG1-214ENST00000540865 IQCA1LA6NCM1 817 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 CCDC85CA6NKD9 419 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 H0YIN7 160 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 GDF9O60383 454 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 ADH1BP00325 375 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 CABP4P57796 275 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 USPL1Q5W0Q7 1092 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 INTS5Q6P9B9 1019 aaKnown RBP6.39□□□□□ -1.39
SNHG1-214ENST00000540865 RETREG3Q86VR2 466 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 C2CD5Q86YS7 1000 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 SALL2Q9Y467 1007 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-214ENST00000540865 RGPD2P0DJD1 1756 aa6.39□□□□□ -1.39
SNHG1-214ENST00000540865 ST20-MTHFSA0A0A6YYL1 179 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 RASSF10A6NK89 507 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 PPM1GO15355 546 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-214ENST00000540865 PTCD1O75127 700 aaKnown RBP6.38□□□□□ -1.39
SNHG1-214ENST00000540865 AP1G2O75843 785 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 DDNO94850 711 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-214ENST00000540865 SERPINB2P05120 415 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 NFIXQ14938 502 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 DEFB115Q30KQ5 88 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 PLA2G2CQ5R387 149 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 PPP2R2DQ66LE6 453 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 TAF1DQ9H5J8 278 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-214ENST00000540865 NARFQ9UHQ1 456 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 LTBP3Q9NS15 1303 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 ITGB4P16144 1822 aa6.38□□□□□ -1.39
SNHG1-214ENST00000540865 ZNF831Q5JPB2 1677 aa6.37□□□□□ -1.39
SNHG1-214ENST00000540865 SOS1Q07889 1333 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-214ENST00000540865 PER1O15534 1290 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-214ENST00000540865 CTDSPL2Q05D32 466 aa6.37□□□□□ -1.39
SNHG1-214ENST00000540865 AMOTQ4VCS5 1084 aa6.37□□□□□ -1.39
SNHG1-214ENST00000540865 PLEKHO1Q53GL0 409 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-214ENST00000540865 SLC6A16Q9GZN6 736 aa6.37□□□□□ -1.39
SNHG1-214ENST00000540865 WDR33Q9C0J8 1336 aaKnown RBP6.36□□□□□ -1.39
SNHG1-214ENST00000540865 SPDYE5A6NIY4 337 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 C21orf2O43822 256 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 MTHFSP49914 203 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 EIF4A2Q14240 407 aaKnown RBP6.36□□□□□ -1.39
SNHG1-214ENST00000540865 SOGA3Q5TF21 947 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 ZNF622Q969S3 477 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNHG1-214ENST00000540865 BRIP1Q9BX63 1249 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms