RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 UFL1O94874 794 aa13.18□□□□□ -0.3
CDCA3-208ENST00000540683 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
CDCA3-208ENST00000540683 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-208ENST00000540683 GPSM2P81274 684 aa13.18□□□□□ -0.3
CDCA3-208ENST00000540683 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
CDCA3-208ENST00000540683 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
CDCA3-208ENST00000540683 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
CDCA3-208ENST00000540683 ECE2O60344 883 aa13.17□□□□□ -0.3
CDCA3-208ENST00000540683 RAD17O75943 681 aa13.17□□□□□ -0.3
CDCA3-208ENST00000540683 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-208ENST00000540683 PODNQ7Z5L7 613 aa13.17□□□□□ -0.3
CDCA3-208ENST00000540683 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
CDCA3-208ENST00000540683 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
CDCA3-208ENST00000540683 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 ALDH1L1O75891 902 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-208ENST00000540683 EPS15P42566 896 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 ECE1P42892 770 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
CDCA3-208ENST00000540683 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 CNOT7Q9UIV1 285 aaKnown RBP13.16□□□□□ -0.3
CDCA3-208ENST00000540683 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
CDCA3-208ENST00000540683 TAF1P21675 1872 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
CDCA3-208ENST00000540683 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-208ENST00000540683 CDC37L1Q7L3B6 337 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 AGBL3Q8NEM8 1001 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-208ENST00000540683 ABT1Q9ULW3 272 aaKnown RBP13.15□□□□□ -0.3
CDCA3-208ENST00000540683 HDAC5Q9UQL6 1122 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
CDCA3-208ENST00000540683 COL4A5P29400 1685 aa13.15□□□□□ -0.31
CDCA3-208ENST00000540683 PTPRCP08575 1304 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 KCNJ4P48050 445 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 G2E3Q7L622 706 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
CDCA3-208ENST00000540683 ZNF609O15014 1411 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 RASSF10A6NK89 507 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 PSMD14O00487 310 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 VIL1P09327 827 aaKnown RBP13.13□□□□□ -0.31
CDCA3-208ENST00000540683 ITGA6P23229 1130 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 HTRA3P83110 453 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
CDCA3-208ENST00000540683 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
CDCA3-208ENST00000540683 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 GREM2Q9H772 168 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
CDCA3-208ENST00000540683 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 YDJCA8MPS7 323 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 GRM8O00222 908 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 CSF1RP07333 972 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
CDCA3-208ENST00000540683 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
CDCA3-208ENST00000540683 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 BEND3Q5T5X7 828 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 MINPP1Q9UNW1 487 aa13.12□□□□□ -0.31
CDCA3-208ENST00000540683 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
CDCA3-208ENST00000540683 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-208ENST00000540683 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
CDCA3-208ENST00000540683 JARID2Q92833 1246 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-208ENST00000540683 MKRN1Q9UHC7 482 aaKnown RBP13.11□□□□□ -0.31
CDCA3-208ENST00000540683 CHMP3Q9Y3E7 222 aa13.11□□□□□ -0.31
CDCA3-208ENST00000540683 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
CDCA3-208ENST00000540683 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
CDCA3-208ENST00000540683 HDAC9Q9UKV0 1011 aa13.1□□□□□ -0.31
CDCA3-208ENST00000540683 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
CDCA3-208ENST00000540683 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
CDCA3-208ENST00000540683 CASP7P55210 303 aa13.09□□□□□ -0.31
CDCA3-208ENST00000540683 KIF4BQ2VIQ3 1234 aa13.09□□□□□ -0.31
CDCA3-208ENST00000540683 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
CDCA3-208ENST00000540683 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
CDCA3-208ENST00000540683 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
CDCA3-208ENST00000540683 CA12O43570 354 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 MAP2K2P36507 400 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 ZNF280AP59817 542 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms