RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 ZMYM1Q5SVZ6 1142 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 BLOC1S2Q6QNY1 142 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 TTLL11Q8NHH1 800 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 SEC62Q99442 399 aaKnown RBP11.43□□□□□ -0.58
LCOR-209ENST00000540664 AKAP2Q9Y2D5 859 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 GOLIM4O00461 696 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 SYT1P21579 422 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
LCOR-209ENST00000540664 ANKRD1Q15327 319 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 ZNF34Q8IZ26 560 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 TMEM87AQ8NBN3 555 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 SYTL4Q96C24 671 aaPredicted RBP11.42□□□□□ -0.58
LCOR-209ENST00000540664 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
LCOR-209ENST00000540664 TPCN1Q9ULQ1 816 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 SMC3Q9UQE7 1217 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 RIPOR2Q9Y4F9 1068 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 ZNF831Q5JPB2 1677 aa11.42□□□□□ -0.58
LCOR-209ENST00000540664 STX6O43752 255 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 ZSCAN22P10073 491 aaPredicted RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 TOB2Q14106 344 aaPredicted RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 FOXD4L5Q5VV16 416 aaPredicted RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 BARGINQ6ZT62 677 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 SYNE4Q8N205 404 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 FOXD4L4Q8WXT5 416 aaPredicted RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 CCDC9Q9Y3X0 531 aaKnown RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 MBD3O95983 291 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 CTSWP56202 376 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 ZSCAN23Q3MJ62 389 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 CCDC129Q6ZRS4 1044 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 CCDC83Q8IWF9 413 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
LCOR-209ENST00000540664 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 DSCC1Q9BVC3 393 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
LCOR-209ENST00000540664 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.58
LCOR-209ENST00000540664 CYP21A2P08686 494 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 GPTP24298 496 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 GJB2P29033 226 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 INTS5Q6P9B9 1019 aaKnown RBP11.4□□□□□ -0.58
LCOR-209ENST00000540664 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.58
LCOR-209ENST00000540664 AK7Q96M32 723 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 UBN2Q6ZU65 1347 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
LCOR-209ENST00000540664 PDIA4P13667 645 aaKnown RBP11.4□□□□□ -0.58
LCOR-209ENST00000540664 ITGA6P23229 1130 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 ADORA1P30542 326 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 CCDC158Q5M9N0 1113 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 CAVIN1Q6NZI2 390 aaKnown RBP11.4□□□□□ -0.58
LCOR-209ENST00000540664 VGLL2Q8N8G2 317 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 GREM2Q9H772 168 aa11.4□□□□□ -0.58
LCOR-209ENST00000540664 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
LCOR-209ENST00000540664 ARAP2Q8WZ64 1704 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 F13A1P00488 732 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 ZNF512BQ96KM6 892 aaPredicted RBP11.39□□□□□ -0.59
LCOR-209ENST00000540664 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 NSFL1CQ9UNZ2 370 aaKnown RBP11.39□□□□□ -0.59
LCOR-209ENST00000540664 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 MAST3O60307 1309 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 ANKRD18BA2A2Z9 1011 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 PDE8AO60658 829 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 C8orf37Q96NL8 207 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 TMEM63CQ9P1W3 806 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
LCOR-209ENST00000540664 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 LAMB2P55268 1798 aa11.39□□□□□ -0.59
LCOR-209ENST00000540664 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
LCOR-209ENST00000540664 TAF7LQ5H9L4 462 aa11.38□□□□□ -0.59
LCOR-209ENST00000540664 TTC39AQ5SRH9 613 aa11.38□□□□□ -0.59
LCOR-209ENST00000540664 NECAB1Q8N987 351 aa11.38□□□□□ -0.59
LCOR-209ENST00000540664 CCDC85AQ96PX6 553 aaPredicted RBP11.38□□□□□ -0.59
LCOR-209ENST00000540664 ARXQ96QS3 562 aa11.38□□□□□ -0.59
LCOR-209ENST00000540664 MYH14Q7Z406 1995 aaKnown RBP11.38□□□□□ -0.59
LCOR-209ENST00000540664 MYH7P12883 1935 aa11.38□□□□□ -0.59
LCOR-209ENST00000540664 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
LCOR-209ENST00000540664 A0A0G2JS52 829 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 HSPD1P10809 573 aaKnown RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 ATP2B3Q16720 1220 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 STOX1Q6ZVD7 989 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 TCHHQ07283 1943 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 LOC102724428A0A0B4J2F2 783 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 SIK1P57059 783 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 ITPK1Q13572 414 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 SCARF1Q14162 830 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 VPS72Q15906 364 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 LRRFIP1Q32MZ4 808 aaKnown RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 TCEANC2Q96MN5 208 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms