RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 JAKMIP1Q96N16 626 aaKnown RBP8.36□□□□□ -1.07
PPFIBP1-211ENST00000540256 EYA1Q99502 592 aa8.36□□□□□ -1.07
PPFIBP1-211ENST00000540256 RCOR1Q9UKL0 485 aa8.36□□□□□ -1.07
PPFIBP1-211ENST00000540256 FMN2Q9NZ56 1722 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 ATP8B1O43520 1251 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 LIG1P18858 919 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 RPS6KB1P23443 525 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 ZNF165P49910 485 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 SLC20A2Q08357 652 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 ST3GAL1Q11201 340 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 TERF2Q15554 542 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 ANO6Q4KMQ2 910 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 ARSIQ5FYB1 569 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 CEP135Q66GS9 1140 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 NOL8Q76FK4 1167 aaKnown RBP8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 LRRC8AQ8IWT6 810 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 KRT222Q8N1A0 295 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 DNAAF4Q8WXU2 420 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 TSC1Q92574 1164 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 BPIFA3Q9BQP9 254 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 TRIM5Q9C035 493 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 OSBPL5Q9H0X9 879 aaPredicted RBP8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 L2HGDHQ9H9P8 463 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 DACT1Q9NYF0 836 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 TBX22Q9Y458 520 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 OVOS2A0A0G2JMS6 1433 aa8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 MED1Q15648 1581 aaPredicted RBP8.35□□□□□ -1.07
PPFIBP1-211ENST00000540256 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 SLC27A2O14975 620 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 LARGE1O95461 756 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 PTH1RQ03431 593 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 STX1AQ16623 288 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 TPD52L1Q16890 204 aaPredicted RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 HDGFL1Q5TGJ6 251 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 BLOC1S2Q6QNY1 142 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 CWC27Q6UX04 472 aaKnown RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 CACTINQ8WUQ7 758 aaKnown RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 NAT10Q9H0A0 1025 aaKnown RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 MIS18AQ9NYP9 233 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 CLIP2Q9UDT6 1046 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 PCDHGA4Q9Y5G9 962 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 RBM8AQ9Y5S9 174 aaKnown RBP8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
PPFIBP1-211ENST00000540256 VPS37CA5D8V6 355 aaPredicted RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 GOLGA6L19H0YKK7 550 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 CCP110O43303 1012 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 FOXO3O43524 673 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 MYO1BO43795 1136 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 HMGB1P09429 215 aaKnown RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 TPM1P09493 284 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 EMP3P54852 163 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 EIF4A1P60842 406 aaKnown RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 RESTQ13127 1097 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 PTPN14Q15678 1187 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 ADCK5Q3MIX3 580 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 LUZP1Q86V48 1076 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 DRC7Q8IY82 874 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 FBXL16Q8N461 479 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 SPC24Q8NBT2 197 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 SMARCC2Q8TAQ2 1214 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 PTCD2Q8WV60 388 aaKnown RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 TSPYL1Q9H0U9 437 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 ANO10Q9NW15 660 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 PODXL2Q9NZ53 605 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 SPG7Q9UQ90 795 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 MED23Q9ULK4 1368 aa8.33□□□□□ -1.08
PPFIBP1-211ENST00000540256 SLU7O95391 586 aaKnown RBP8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 LTKP29376 864 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 AMPHP49418 695 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 BMS1Q14692 1282 aaKnown RBP8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 CCAR2Q8N163 923 aaKnown RBP8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 GTF3C6Q969F1 213 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 PGBD1Q96JS3 809 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 CALCOCO1Q9P1Z2 691 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 COL15A1P39059 1388 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 MRC1P22897 1456 aa8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.32□□□□□ -1.08
PPFIBP1-211ENST00000540256 NCAPD2Q15021 1401 aa8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 A0A1W2PQ27 194 aa8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 A0A1W2PQ64 194 aa8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 A0A1W2PQD8 194 aa8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 NRDCO43847 1150 aa8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 H2AFXP16104 143 aaPredicted RBP8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 TOB2Q14106 344 aaPredicted RBP8.31□□□□□ -1.08
PPFIBP1-211ENST00000540256 CCDC93Q567U6 631 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms