RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
PBX1-212ENST00000540236 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 hCG_2014768A0A024R1R8 64 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 CHMLP26374 656 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 GNL3LQ9NVN8 582 aaKnown RBP12.66□□□□□ -0.38
PBX1-212ENST00000540236 RALGAPBQ86X10 1494 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 RAD54L2Q9Y4B4 1467 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 FAM167BQ9BTA0 163 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 H3BQF6 201 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 PPP1R12CQ9BZL4 782 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 ZC3H6P61129 1189 aaKnown RBP12.65□□□□□ -0.38
PBX1-212ENST00000540236 HLTFQ14527 1009 aaKnown RBP eCLIP12.65□□□□□ -0.38
PBX1-212ENST00000540236 SMIM24O75264 130 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 TOP2BQ02880 1626 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
PBX1-212ENST00000540236 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 BRF1Q92994 677 aa12.65□□□□□ -0.38
PBX1-212ENST00000540236 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.39
PBX1-212ENST00000540236 GOLGA6BA6NDN3 693 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 JAK2O60674 1132 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 CCDC175P0C221 793 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.64□□□□□ -0.39
PBX1-212ENST00000540236 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
PBX1-212ENST00000540236 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
PBX1-212ENST00000540236 BOLA2Q9H3K6 86 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
PBX1-212ENST00000540236 SELENOSQ9BQE4 189 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 ENC1O14682 589 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 CTAGE5O15320 804 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 CAVIN2O95810 425 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
PBX1-212ENST00000540236 MACROD2A1Z1Q3 448 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 SLC20A2Q08357 652 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 CCDC178Q5BJE1 867 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 EHBP1L1Q8N3D4 1523 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 MXRA7P84157 204 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
PBX1-212ENST00000540236 RPAP2Q8IXW5 612 aaPredicted RBP12.64□□□□□ -0.39
PBX1-212ENST00000540236 FNBP4Q8N3X1 1017 aaPredicted RBP12.64□□□□□ -0.39
PBX1-212ENST00000540236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
PBX1-212ENST00000540236 CLTAP09496 248 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 OTUD7BQ6GQQ9 843 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 CCDC8Q9H0W5 538 aaPredicted RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 ABCC5O15440 1437 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 RBM5P52756 815 aaKnown RBP eCLIP12.63□□□□□ -0.39
PBX1-212ENST00000540236 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 TOGARAM2Q6ZUX3 1019 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 SND1Q7KZF4 910 aaKnown RBP eCLIP12.63□□□□□ -0.39
PBX1-212ENST00000540236 TRMT44Q8IYL2 757 aaKnown RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 KDM5CP41229 1560 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 KIF14Q15058 1648 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 PSEN1P49768 467 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 SH2B1Q9NRF2 756 aaPredicted RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 ABCF2Q9UG63 623 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 PTPRCP08575 1304 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 SASH3O75995 380 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
PBX1-212ENST00000540236 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
PBX1-212ENST00000540236 TMCO5BA8MYB1 307 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 ELF1P32519 619 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 FANCLQ9NW38 375 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 IFFO1Q0D2I5 559 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 ME3Q16798 604 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 PCK1P35558 622 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 ETF1P62495 437 aaKnown RBP12.62□□□□□ -0.39
PBX1-212ENST00000540236 CASP8Q14790 479 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
PBX1-212ENST00000540236 B4GALNT4Q76KP1 1039 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 TESK2Q96S53 571 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 NBPF7P0C2Y1 421 aaPredicted RBP12.62□□□□□ -0.39
PBX1-212ENST00000540236 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
PBX1-212ENST00000540236 ANKRD1Q15327 319 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 USP28Q96RU2 1077 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 MSH6P52701 1360 aa12.62□□□□□ -0.39
PBX1-212ENST00000540236 CCT6AP40227 531 aaKnown RBP12.61□□□□□ -0.39
PBX1-212ENST00000540236 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 CPLX4Q7Z7G2 160 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
PBX1-212ENST00000540236 GNPTABQ3T906 1256 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms