RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 BECN2A8MW95 431 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 POLR3GO15318 223 aaPredicted RBP10.22□□□□□ -0.77
DDB1-217ENST00000540166 MX1P20591 662 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 TERF2Q15554 542 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
DDB1-217ENST00000540166 EAPPQ56P03 285 aaPredicted RBP10.22□□□□□ -0.77
DDB1-217ENST00000540166 TTC22Q5TAA0 569 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 C8orf58Q8NAV2 365 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 BEGAINQ9BUH8 593 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 NARFQ9UHQ1 456 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 NSFL1CQ9UNZ2 370 aaKnown RBP10.22□□□□□ -0.77
DDB1-217ENST00000540166 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
DDB1-217ENST00000540166 GIMAP6Q6P9H5 292 aa10.21□□□□□ -0.77
DDB1-217ENST00000540166 CCDC186Q7Z3E2 898 aa10.21□□□□□ -0.77
DDB1-217ENST00000540166 RPAP2Q8IXW5 612 aaPredicted RBP10.21□□□□□ -0.77
DDB1-217ENST00000540166 TRMT112Q9UI30 125 aaKnown RBP10.21□□□□□ -0.77
DDB1-217ENST00000540166 GJA3Q9Y6H8 435 aa10.21□□□□□ -0.77
DDB1-217ENST00000540166 PTGS1P23219 599 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 EIF6P56537 245 aaKnown RBP10.21□□□□□ -0.78
DDB1-217ENST00000540166 DDX46Q7L014 1031 aaKnown RBP10.21□□□□□ -0.78
DDB1-217ENST00000540166 PLEKHM2Q8IWE5 1019 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 SLC4A2P04920 1241 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 CHRNA5P30532 468 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 RNF20Q5VTR2 975 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 HOMER1Q86YM7 354 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 MNS1Q8NEH6 495 aa10.21□□□□□ -0.78
DDB1-217ENST00000540166 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.21□□□□□ -0.78
DDB1-217ENST00000540166 ALS2Q96Q42 1657 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 VPS37CA5D8V6 355 aaPredicted RBP10.2□□□□□ -0.78
DDB1-217ENST00000540166 SDSP20132 328 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 ALDH1B1P30837 517 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 OS9Q13438 667 aaPredicted RBP10.2□□□□□ -0.78
DDB1-217ENST00000540166 ERFEQ4G0M1 354 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 KIAA1524Q8TCG1 905 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 RASSF4Q9H2L5 321 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 IL6STP40189 918 aaPredicted RBP10.2□□□□□ -0.78
DDB1-217ENST00000540166 GNL2Q13823 731 aaKnown RBP10.2□□□□□ -0.78
DDB1-217ENST00000540166 KIF18AQ8NI77 898 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 USP26Q9BXU7 913 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 PYCARDQ9ULZ3 195 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 C9orf131Q5VYM1 1079 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 KIF2CQ99661 725 aa10.2□□□□□ -0.78
DDB1-217ENST00000540166 CREBRFQ8IUR6 639 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 SPTLC3Q9NUV7 552 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 DDX41Q9UJV9 622 aaKnown RBP10.19□□□□□ -0.78
DDB1-217ENST00000540166 CNTNAP4Q9C0A0 1308 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 UBE2HP62256 183 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 NCBP1Q09161 790 aaKnown RBP10.19□□□□□ -0.78
DDB1-217ENST00000540166 GORABQ5T7V8 394 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 OTUD7AQ8TE49 926 aaPredicted RBP10.19□□□□□ -0.78
DDB1-217ENST00000540166 DEF6Q9H4E7 631 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 EXOC6BQ9Y2D4 811 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
DDB1-217ENST00000540166 C6orf229H3BNL8 230 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 TMCO3Q6UWJ1 677 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 C10orf67Q8IYJ2 551 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 ZNF784Q8NCA9 323 aaPredicted RBP10.19□□□□□ -0.78
DDB1-217ENST00000540166 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
DDB1-217ENST00000540166 DCTPP1Q9H773 170 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 RSPH14Q9UHP6 348 aa10.19□□□□□ -0.78
DDB1-217ENST00000540166 C21orf2O43822 256 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 GADD45BO75293 160 aaPredicted RBP10.18□□□□□ -0.78
DDB1-217ENST00000540166 TXLNBQ8N3L3 684 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 LARGE2Q8N3Y3 721 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 ANKRD7Q92527 254 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 UPF3BQ9BZI7 483 aaKnown RBP10.18□□□□□ -0.78
DDB1-217ENST00000540166 CTNNA3Q9UI47 895 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 TRPM3Q9HCF6 1732 aaPredicted RBP10.18□□□□□ -0.78
DDB1-217ENST00000540166 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.18□□□□□ -0.78
DDB1-217ENST00000540166 GYS1P13807 737 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 NFIXQ14938 502 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 LEKR1Q6ZMV7 388 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 IL17REQ8NFR9 667 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 GTF3C6Q969F1 213 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 RBM17Q96I25 401 aaKnown RBP10.18□□□□□ -0.78
DDB1-217ENST00000540166 TAOK3Q9H2K8 898 aa10.18□□□□□ -0.78
DDB1-217ENST00000540166 PHRF1Q9P1Y6 1649 aaKnown RBP10.18□□□□□ -0.78
DDB1-217ENST00000540166 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
DDB1-217ENST00000540166 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 TMX1Q9H3N1 280 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 RGPD1P0DJD0 1748 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 MARF1Q9Y4F3 1742 aaKnown RBP10.17□□□□□ -0.78
DDB1-217ENST00000540166 PTGER2P43116 358 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 KRT24Q2M2I5 525 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 CTR9Q6PD62 1173 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 FILIP1Q7Z7B0 1213 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 BICD2Q8TD16 824 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 NUP62CLQ9H1M0 184 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 TNMDQ9H2S6 317 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 TRMT1Q9NXH9 659 aaKnown RBP10.17□□□□□ -0.78
DDB1-217ENST00000540166 CLIP2Q9UDT6 1046 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 USP16Q9Y5T5 823 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 BCL9O00512 1426 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 PIK3C2AO00443 1686 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 CYP19A1P11511 503 aaPredicted RBP10.17□□□□□ -0.78
DDB1-217ENST00000540166 UBXN4Q92575 508 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 MEIS3Q99687 375 aa10.17□□□□□ -0.78
DDB1-217ENST00000540166 CNPY2Q9Y2B0 182 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms