RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ABCC4O15439 1325 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 UBN2Q6ZU65 1347 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 SLC10A3P09131 477 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 FKBP1BP68106 108 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 GRAPQ13588 217 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
CPSF7-219ENST00000539952 C3orf67Q6ZVT6 689 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 SAMD7Q7Z3H4 446 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 SULF1Q8IWU6 871 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 GRAPLQ8TC17 118 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-219ENST00000539952 PHF12Q96QT6 1004 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 HDAC9Q9UKV0 1011 aa7.82□□□□□ -1.16
CPSF7-219ENST00000539952 SUPT16HQ9Y5B9 1047 aaKnown RBP7.82□□□□□ -1.16
CPSF7-219ENST00000539952 THSD7BQ9C0I4 1608 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 YDJCA8MPS7 323 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 PSMD14O00487 310 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 CNGB1Q14028 1251 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-219ENST00000539952 NECTIN2Q92692 538 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 EYA3Q99504 573 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
CPSF7-219ENST00000539952 NSFL1CQ9UNZ2 370 aaKnown RBP7.81□□□□□ -1.16
CPSF7-219ENST00000539952 HPS5Q9UPZ3 1129 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 COL4A5P29400 1685 aa7.81□□□□□ -1.16
CPSF7-219ENST00000539952 VIL1P09327 827 aaKnown RBP7.8□□□□□ -1.16
CPSF7-219ENST00000539952 TCIRG1Q13488 830 aa7.8□□□□□ -1.16
CPSF7-219ENST00000539952 TBC1D10BQ4KMP7 808 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-219ENST00000539952 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
CPSF7-219ENST00000539952 DLK2Q6UY11 383 aa7.8□□□□□ -1.16
CPSF7-219ENST00000539952 ZC3H12CQ9C0D7 883 aaKnown RBP7.8□□□□□ -1.16
CPSF7-219ENST00000539952 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-219ENST00000539952 TRMT112Q9UI30 125 aaKnown RBP7.8□□□□□ -1.16
CPSF7-219ENST00000539952 SH3TC1Q8TE82 1336 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 BCORQ6W2J9 1755 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 G3V3G9 751 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 CCER2I3L3R5 266 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 STK25O00506 426 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 MAP3K13O43283 966 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-219ENST00000539952 CD44P16070 742 aaKnown RBP7.79□□□□□ -1.16
CPSF7-219ENST00000539952 EIF2S2P20042 333 aaKnown RBP7.79□□□□□ -1.16
CPSF7-219ENST00000539952 TM4SF4P48230 202 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 SF3B3Q15393 1217 aaKnown RBP7.79□□□□□ -1.16
CPSF7-219ENST00000539952 BABAM1Q9NWV8 329 aa7.79□□□□□ -1.16
CPSF7-219ENST00000539952 SIPA1L3O60292 1781 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-219ENST00000539952 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 EVX2Q03828 476 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 SCARF1Q14162 830 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 PDIA6Q15084 440 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 KIF4BQ2VIQ3 1234 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
CPSF7-219ENST00000539952 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-219ENST00000539952 COPS6Q7L5N1 327 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 NLRP10Q86W26 655 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 IFNL1Q8IU54 200 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 AGBL3Q8NEM8 1001 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-219ENST00000539952 DBNDD1Q9H9R9 158 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 TSHZ2Q9NRE2 1034 aa7.78□□□□□ -1.16
CPSF7-219ENST00000539952 COL3A1P02461 1466 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-219ENST00000539952 ADM5C9JUS6 153 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 GPR25O00155 361 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 ECE2O60344 883 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 TBC1D8O95759 1140 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 EGFRP00533 1210 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
CPSF7-219ENST00000539952 RPS8P62241 208 aaKnown RBP7.77□□□□□ -1.17
CPSF7-219ENST00000539952 HABP4Q5JVS0 413 aaKnown RBP7.77□□□□□ -1.17
CPSF7-219ENST00000539952 LRP10Q7Z4F1 713 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 SLC51AQ86UW1 340 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 CDCA5Q96FF9 252 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 KIF12Q96FN5 646 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 THUMPD2Q9BTF0 503 aaKnown RBP7.77□□□□□ -1.17
CPSF7-219ENST00000539952 KCNQ5Q9NR82 932 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 POLLQ9UGP5 575 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 TRPC6Q9Y210 931 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 STK24Q9Y6E0 443 aa7.77□□□□□ -1.17
CPSF7-219ENST00000539952 NUP98P52948 1817 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 FKTNO75072 461 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 ALDH1A1P00352 501 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 NEFLP07196 543 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 NF2P35240 595 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 MMP14P50281 582 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 INHBEP58166 350 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 ZNF280AP59817 542 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-219ENST00000539952 AIMP1Q12904 312 aaKnown RBP7.76□□□□□ -1.17
CPSF7-219ENST00000539952 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 DOK7Q18PE1 504 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 RASAL3Q86YV0 1011 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 TBC1D16Q8TBP0 767 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 CFHR5Q9BXR6 569 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 GGA3Q9NZ52 723 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 PODXL2Q9NZ53 605 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 TSPYL4Q9UJ04 414 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 PITPNM2Q9BZ72 1349 aa7.76□□□□□ -1.17
CPSF7-219ENST00000539952 POLR2AP24928 1970 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms