RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 HLFQ16534 295 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 VPS53Q5VIR6 699 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 ZNF512BQ96KM6 892 aaPredicted RBP12.2□□□□□ -0.46
SPARC-209ENST00000539687 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
SPARC-209ENST00000539687 PAG1Q9NWQ8 432 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 PALD1Q9ULE6 856 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
SPARC-209ENST00000539687 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 NUP98P52948 1817 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 ITGA6P23229 1130 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 GPTP24298 496 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 NECTIN1Q15223 517 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 TTF1Q15361 905 aaPredicted RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 TTC39AQ5SRH9 613 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 ZSCAN25Q6NSZ9 544 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 DNAJC2Q99543 621 aaKnown RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 RBM8AQ9Y5S9 174 aaKnown RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
SPARC-209ENST00000539687 MYH3P11055 1940 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 LRP5O75197 1615 aa12.19□□□□□ -0.46
SPARC-209ENST00000539687 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
SPARC-209ENST00000539687 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 SSFA2P28290 1259 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 CCDC152Q4G0S7 254 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPARC-209ENST00000539687 ALDH8A1Q9H2A2 487 aaPredicted RBP12.18□□□□□ -0.46
SPARC-209ENST00000539687 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 CNNM1Q9NRU3 951 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 TRPC5Q9UL62 973 aaPredicted RBP12.18□□□□□ -0.46
SPARC-209ENST00000539687 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
SPARC-209ENST00000539687 TBC1D2BQ9UPU7 963 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 NHSQ6T4R5 1651 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 LAMB2P55268 1798 aa12.18□□□□□ -0.46
SPARC-209ENST00000539687 EP400Q96L91 3159 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
SPARC-209ENST00000539687 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 PRPF40BQ6NWY9 871 aaKnown RBP12.17□□□□□ -0.46
SPARC-209ENST00000539687 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 FAM227BQ96M60 508 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 DSCC1Q9BVC3 393 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 IL25Q9H293 177 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 RIPOR2Q9Y4F9 1068 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.17□□□□□ -0.46
SPARC-209ENST00000539687 BCORQ6W2J9 1755 aa12.17□□□□□ -0.46
SPARC-209ENST00000539687 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
SPARC-209ENST00000539687 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 A0A0D9SFI3 127 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 TAF5LO75529 589 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 CYP2E1P05181 493 aaPredicted RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 CASTP20810 708 aaKnown RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 IGHMBP2P38935 993 aaKnown RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 ITPK1Q13572 414 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 BLOC1S2Q6QNY1 142 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 RUFY3Q7L099 469 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 XAGE2Q96GT9 111 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 TTC14Q96N46 770 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
SPARC-209ENST00000539687 NYXQ9GZU5 481 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 GREM2Q9H772 168 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
SPARC-209ENST00000539687 ATRNO75882 1429 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 GOLIM4O00461 696 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 SLC27A2O14975 620 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
SPARC-209ENST00000539687 PDE8BO95263 885 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 TIMM10P62072 90 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 PTH1RQ03431 593 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 ZMYM1Q5SVZ6 1142 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 LPIN2Q92539 896 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 MPHOSPH8Q99549 860 aa12.15□□□□□ -0.46
SPARC-209ENST00000539687 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
SPARC-209ENST00000539687 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPARC-209ENST00000539687 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
SPARC-209ENST00000539687 TRAK2O60296 914 aa12.14□□□□□ -0.47
SPARC-209ENST00000539687 SLC5A1P13866 664 aa12.14□□□□□ -0.47
SPARC-209ENST00000539687 AK2P54819 239 aa12.14□□□□□ -0.47
SPARC-209ENST00000539687 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
SPARC-209ENST00000539687 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms