RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MRC1P22897 1456 aa20.59■□□□□ 0.89
RAB40C-205ENST00000539661 KSR2Q6VAB6 950 aa20.58■□□□□ 0.89
RAB40C-205ENST00000539661 CCDC150Q8NCX0 1101 aa20.58■□□□□ 0.89
RAB40C-205ENST00000539661 TIGD1Q96MW7 591 aa20.58■□□□□ 0.89
RAB40C-205ENST00000539661 ZNF396Q96N95 335 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-205ENST00000539661 TRMT1Q9NXH9 659 aaKnown RBP20.58■□□□□ 0.89
RAB40C-205ENST00000539661 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.89
RAB40C-205ENST00000539661 FER1L4A9Z1Z3 1794 aa20.58■□□□□ 0.89
RAB40C-205ENST00000539661 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.58■□□□□ 0.89
RAB40C-205ENST00000539661 MAP3K2Q9Y2U5 619 aa20.58■□□□□ 0.89
RAB40C-205ENST00000539661 V9GYY5 206 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-205ENST00000539661 NLRP6P59044 892 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 TMEM51Q9NW97 253 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 ZNF589Q86UQ0 364 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-205ENST00000539661 CCDC8Q9H0W5 538 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-205ENST00000539661 BOLA2Q9H3K6 86 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 GOLPH3LQ9H4A5 285 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-205ENST00000539661 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 Q6ZUG5 572 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 BPIFA3Q9BQP9 254 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 ZNF446Q9NWS9 450 aa20.57■□□□□ 0.88
RAB40C-205ENST00000539661 NCAPD2Q15021 1401 aa20.56■□□□□ 0.88
RAB40C-205ENST00000539661 USHBP1Q8N6Y0 703 aa20.56■□□□□ 0.88
RAB40C-205ENST00000539661 TBX22Q9Y458 520 aa20.56■□□□□ 0.88
RAB40C-205ENST00000539661 PFKFB2O60825 505 aa20.56■□□□□ 0.88
RAB40C-205ENST00000539661 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
RAB40C-205ENST00000539661 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
RAB40C-205ENST00000539661 SETD1BQ9UPS6 1966 aaKnown RBP20.55■□□□□ 0.88
RAB40C-205ENST00000539661 NRDCO43847 1150 aa20.55■□□□□ 0.88
RAB40C-205ENST00000539661 NBPF11Q86T75 865 aa20.55■□□□□ 0.88
RAB40C-205ENST00000539661 AOPEPQ8N6M6 819 aa20.55■□□□□ 0.88
RAB40C-205ENST00000539661 BBXQ8WY36 941 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-205ENST00000539661 LMO7Q8WWI1 1683 aa20.55■□□□□ 0.88
RAB40C-205ENST00000539661 GRM8O00222 908 aa20.55■□□□□ 0.88
RAB40C-205ENST00000539661 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
RAB40C-205ENST00000539661 HMGB1P09429 215 aaKnown RBP20.54■□□□□ 0.88
RAB40C-205ENST00000539661 SCRN1Q12765 414 aa20.54■□□□□ 0.88
RAB40C-205ENST00000539661 E4F1Q66K89 784 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-205ENST00000539661 PPP1R13BQ96KQ4 1090 aa20.54■□□□□ 0.88
RAB40C-205ENST00000539661 NOL10Q9BSC4 688 aaKnown RBP20.54■□□□□ 0.88
RAB40C-205ENST00000539661 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-205ENST00000539661 TLR7Q9NYK1 1049 aaKnown RBP20.54■□□□□ 0.88
RAB40C-205ENST00000539661 CCP110O43303 1012 aa20.53■□□□□ 0.88
RAB40C-205ENST00000539661 ANXA1P04083 346 aa20.53■□□□□ 0.88
RAB40C-205ENST00000539661 SUCLG2Q96I99 432 aa20.53■□□□□ 0.88
RAB40C-205ENST00000539661 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
RAB40C-205ENST00000539661 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
RAB40C-205ENST00000539661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-205ENST00000539661 BTBD11A6QL63 1104 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 CYP2C19P33261 490 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 CEBPZQ03701 1054 aaKnown RBP20.52■□□□□ 0.88
RAB40C-205ENST00000539661 TEFQ10587 303 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 FSIP1Q8NA03 581 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 CHMP4CQ96CF2 233 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 KAZALD1Q96I82 304 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 USP28Q96RU2 1077 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
RAB40C-205ENST00000539661 FHOD1Q9Y613 1164 aa20.52■□□□□ 0.88
RAB40C-205ENST00000539661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.52■□□□□ 0.875e-6■■■■□ 23
RAB40C-205ENST00000539661 SLC20A2Q08357 652 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 ERCC6LQ2NKX8 1250 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 ABCC6O95255 1503 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 A0A1W2PQ27 194 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 A0A1W2PQ64 194 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 A0A1W2PQD8 194 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 KCNQ3O43525 872 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 ATP5JP18859 108 aa20.51■□□□□ 0.87
RAB40C-205ENST00000539661 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
RAB40C-205ENST00000539661 CWF19L2Q2TBE0 894 aaKnown RBP20.51■□□□□ 0.87
RAB40C-205ENST00000539661 FMR1NBQ8N0W7 255 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-205ENST00000539661 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
RAB40C-205ENST00000539661 ARGLU1Q9NWB6 273 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-205ENST00000539661 ANKARQ7Z5J8 1434 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 TPM4P67936 248 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 COL15A1P39059 1388 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 ARHGAP23Q9P227 1491 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 PHLPP2Q6ZVD8 1323 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 CLCN6P51797 869 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
RAB40C-205ENST00000539661 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-205ENST00000539661 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
RAB40C-205ENST00000539661 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
RAB40C-205ENST00000539661 ME1P48163 572 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 IRX5P78411 483 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-205ENST00000539661 ADALQ6DHV7 355 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 SYT10Q6XYQ8 523 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 PTPDC1A2A3K4 754 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 ATP8B1O43520 1251 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 CYP21A2P08686 494 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 ARMCX5Q6P1M9 558 aa20.49■□□□□ 0.87
RAB40C-205ENST00000539661 TULP2O00295 520 aa20.48■□□□□ 0.87
RAB40C-205ENST00000539661 PNMA6AP0CW24 399 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-205ENST00000539661 ZRSR1Q15695 479 aaKnown RBP20.48■□□□□ 0.87
RAB40C-205ENST00000539661 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
RAB40C-205ENST00000539661 AGXT2Q9BYV1 514 aa20.48■□□□□ 0.87
RAB40C-205ENST00000539661 KIAA1468Q9P260 1216 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms