RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SH3PXD2AQ5TCZ1 1133 aa5.59□□□□□ -1.51
AC055720.1-201ENST00000539552 HDGFL1Q5TGJ6 251 aa5.59□□□□□ -1.51
AC055720.1-201ENST00000539552 TRIM50Q86XT4 487 aa5.59□□□□□ -1.51
AC055720.1-201ENST00000539552 ZNF280CQ8ND82 737 aa5.59□□□□□ -1.51
AC055720.1-201ENST00000539552 POLR3GLQ9BT43 218 aa5.59□□□□□ -1.51
AC055720.1-201ENST00000539552 ARID1BQ8NFD5 2236 aaPredicted RBP5.59□□□□□ -1.52
AC055720.1-201ENST00000539552 URB2Q14146 1524 aaKnown RBP5.58□□□□□ -1.52
AC055720.1-201ENST00000539552 ALX3O95076 343 aa5.58□□□□□ -1.52
AC055720.1-201ENST00000539552 SND1Q7KZF4 910 aaKnown RBP eCLIP5.58□□□□□ -1.52
AC055720.1-201ENST00000539552 DHX37Q8IY37 1157 aaKnown RBP5.58□□□□□ -1.52
AC055720.1-201ENST00000539552 LTBP4Q8N2S1 1624 aa5.58□□□□□ -1.52
AC055720.1-201ENST00000539552 CEP164Q9UPV0 1460 aa5.58□□□□□ -1.52
AC055720.1-201ENST00000539552 UNCXA6NJT0 531 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 PPM1GO15355 546 aaPredicted RBP5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 ATP1A2P50993 1020 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 HIRAP54198 1017 aaPredicted RBP5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 TMEM130Q8N3G9 435 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 C7orf43Q8WVR3 580 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 LPIN3Q9BQK8 851 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 GSX2Q9BZM3 304 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 RBSNQ9H1K0 784 aa5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 SRA1Q9HD15 236 aaKnown RBP5.57□□□□□ -1.52
AC055720.1-201ENST00000539552 F8W735 103 aaPredicted RBP5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 PPP1R12BO60237 982 aaPredicted RBP5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 EIF2AK2P19525 551 aaKnown RBP5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 EPHA4P54764 986 aa5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 NCOA4Q13772 614 aa5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 PERM1Q5SV97 790 aa5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 DHX32Q7L7V1 743 aaKnown RBP5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 MAP4K3Q8IVH8 894 aa5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 TTC9Q92623 222 aa5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 CEP41Q9BYV8 373 aa5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 SMG9Q9H0W8 520 aaKnown RBP5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 TSPAN10Q9H1Z9 355 aaPredicted RBP5.56□□□□□ -1.52
AC055720.1-201ENST00000539552 RBM47A0AV96 593 aaKnown RBP5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 POM121CA8CG34 1229 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 DLL1O00548 723 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 MED26O95402 600 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 JAG1P78504 1218 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 KRT25Q7Z3Z0 450 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 ALDH16A1Q8IZ83 802 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 TPCN2Q8NHX9 752 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 NGLY1Q96IV0 654 aa5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 ANGEL1Q9UNK9 670 aaKnown RBP5.55□□□□□ -1.52
AC055720.1-201ENST00000539552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 DEAF1O75398 565 aaPredicted RBP5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 RARAP10276 462 aa5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 MLLT1Q03111 559 aaPredicted RBP5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 NFIAQ12857 509 aa5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 GRIK5Q16478 980 aa5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 IVNS1ABPQ9Y6Y0 642 aa5.54□□□□□ -1.52
AC055720.1-201ENST00000539552 MAP3K6O95382 1288 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 GHRHP01286 108 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 LMOD1P29536 600 aaPredicted RBP5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 GPLD1P80108 840 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 CCDC102BQ68D86 513 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 GDF6Q6KF10 455 aaPredicted RBP5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 UBE2Q2Q8WVN8 375 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 UTP4Q969X6 686 aaKnown RBP5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 ASIC4Q96FT7 647 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 VRTNQ9H8Y1 702 aa5.53□□□□□ -1.52
AC055720.1-201ENST00000539552 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 SPINK2P20155 84 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 IER5Q5VY09 327 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 AGGF1Q8N302 714 aaeCLIP5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 IL22RA1Q8N6P7 574 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 NFATC2IPQ8NCF5 419 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 GIMAP7Q8NHV1 300 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 TRPM4Q8TD43 1214 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 CHMP7Q8WUX9 453 aaPredicted RBP5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
AC055720.1-201ENST00000539552 PTPRMP28827 1452 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 TGFBR3LH3BV60 316 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 UVSSAQ2YD98 709 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 OGFOD2Q6N063 350 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 HFE2Q6ZVN8 426 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 DTX1Q86Y01 620 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 ZDHHC13Q8IUH4 622 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 CCER1Q8TC90 406 aaPredicted RBP5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 SPATA32Q96LK8 384 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 MUC3BQ9H195 1237 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 MAPKBP1O60336 1514 aa5.51□□□□□ -1.53
AC055720.1-201ENST00000539552 SYNJ1O43426 1573 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 ADAMTSL3P82987 1691 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 PALM3A6NDB9 673 aaPredicted RBP5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 USP17L5A8MUK1 530 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 SART1O43290 800 aaKnown RBP5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 RNF43Q68DV7 783 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 CACTIN-AS1Q8N1I8 211 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 DEPDC4Q8N2C3 294 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 PLD4Q96BZ4 506 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 BCL11AQ9H165 835 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 CWC22Q9HCG8 908 aaKnown RBP5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 IFT140Q96RY7 1462 aa5.5□□□□□ -1.53
AC055720.1-201ENST00000539552 KIF21BO75037 1637 aa5.49□□□□□ -1.53
AC055720.1-201ENST00000539552 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
AC055720.1-201ENST00000539552 M0R2N6 131 aa5.49□□□□□ -1.53
AC055720.1-201ENST00000539552 C8AP07357 584 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms