RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 SARM1Q6SZW1 724 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 SCN11AQ9UI33 1791 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 ZNF609O15014 1411 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 LAMA4Q16363 1823 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 CYP21A2P08686 494 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 HMGB1P09429 215 aaKnown RBP11.38□□□□□ -0.59
CDH13-204ENST00000539548 DMTNQ08495 405 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 TFCP2Q12800 502 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 ATP2B3Q16720 1220 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 MYD88Q99836 296 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 HAUS7Q99871 368 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 CLIP2Q9UDT6 1046 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 HSP90B1P14625 803 aaKnown RBP11.37□□□□□ -0.59
CDH13-204ENST00000539548 ZSCAN20P17040 1043 aaPredicted RBP11.37□□□□□ -0.59
CDH13-204ENST00000539548 RABL6Q3YEC7 729 aaPredicted RBP11.37□□□□□ -0.59
CDH13-204ENST00000539548 ATL3Q6DD88 541 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 NEMFO60524 1076 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 MYL6BP14649 208 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 SCRN1Q12765 414 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 CACTINQ8WUQ7 758 aaKnown RBP11.37□□□□□ -0.59
CDH13-204ENST00000539548 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 MRFAP1L1Q96HT8 127 aa11.37□□□□□ -0.59
CDH13-204ENST00000539548 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
CDH13-204ENST00000539548 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 TNNT1P13805 278 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 CBX1P83916 185 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 DHX32Q7L7V1 743 aaKnown RBP11.36□□□□□ -0.59
CDH13-204ENST00000539548 SEC62Q99442 399 aaKnown RBP11.36□□□□□ -0.59
CDH13-204ENST00000539548 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 RGPD5Q99666 1765 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 SH3TC1Q8TE82 1336 aa11.36□□□□□ -0.59
CDH13-204ENST00000539548 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 STX1AQ16623 288 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 CCDC144BQ3MJ40 725 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 LRP10Q7Z4F1 713 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 KBTBD3Q8NAB2 608 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 AGXT2Q9BYV1 514 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 GTPBP4Q9BZE4 634 aaKnown RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 PRDM10Q9NQV6 1147 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 RBM6P78332 1123 aaKnown RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 EXOSC10Q01780 885 aaKnown RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 LRRC8AQ8IWT6 810 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 C16orf45Q96MC5 204 aaPredicted RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 ZNF396Q96N95 335 aaPredicted RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
CDH13-204ENST00000539548 FEZ1Q99689 392 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 DBNDD2Q9BQY9 259 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 HELLSQ9NRZ9 838 aa11.35□□□□□ -0.59
CDH13-204ENST00000539548 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 FGD1P98174 961 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
CDH13-204ENST00000539548 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
CDH13-204ENST00000539548 TPD52L1Q16890 204 aaPredicted RBP11.34□□□□□ -0.59
CDH13-204ENST00000539548 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 ENGASEQ8NFI3 743 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 CHMP4CQ96CF2 233 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 CCDC73Q6ZRK6 1079 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 C11orf57Q6ZUT1 292 aaPredicted RBP11.34□□□□□ -0.59
CDH13-204ENST00000539548 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
CDH13-204ENST00000539548 NDUFB9Q9Y6M9 179 aa11.34□□□□□ -0.59
CDH13-204ENST00000539548 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.59
CDH13-204ENST00000539548 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 CHGBP05060 677 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 FAM160A1Q05DH4 1040 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 CCDC112Q8NEF3 446 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 ANO10Q9NW15 660 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 KINO60870 393 aaKnown RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 CASP7P55210 303 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 CEBPZQ03701 1054 aaKnown RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
CDH13-204ENST00000539548 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 ORAI2Q96SN7 254 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 GPR108Q9NPR9 543 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 KCND1Q9NSA2 647 aa11.33□□□□□ -0.6
CDH13-204ENST00000539548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms