RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 POLR3GO15318 223 aaPredicted RBP14.03□□□□□ -0.16
NEK6-212ENST00000539416 GJB2P29033 226 aa14.03□□□□□ -0.16
NEK6-212ENST00000539416 CLCN6P51797 869 aa14.03□□□□□ -0.16
NEK6-212ENST00000539416 TMX1Q9H3N1 280 aa14.03□□□□□ -0.16
NEK6-212ENST00000539416 TNS2Q63HR2 1409 aa14.03□□□□□ -0.16
NEK6-212ENST00000539416 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.16
NEK6-212ENST00000539416 TNNT3P45378 269 aaPredicted RBP14.02□□□□□ -0.16
NEK6-212ENST00000539416 SYT10Q6XYQ8 523 aa14.02□□□□□ -0.16
NEK6-212ENST00000539416 CCDC83Q8IWF9 413 aa14.02□□□□□ -0.16
NEK6-212ENST00000539416 RASEFQ8IZ41 740 aa14.02□□□□□ -0.16
NEK6-212ENST00000539416 DACT1Q9NYF0 836 aa14.02□□□□□ -0.16
NEK6-212ENST00000539416 SNX14Q9Y5W7 946 aa14.02□□□□□ -0.16
NEK6-212ENST00000539416 AFF2P51816 1311 aa14.02□□□□□ -0.16
NEK6-212ENST00000539416 VPS37CA5D8V6 355 aaPredicted RBP14.02□□□□□ -0.17
NEK6-212ENST00000539416 TRIM66O15016 1216 aa14.02□□□□□ -0.17
NEK6-212ENST00000539416 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.17
NEK6-212ENST00000539416 DNAJC25Q9H1X3 360 aa14.02□□□□□ -0.17
NEK6-212ENST00000539416 TNMDQ9H2S6 317 aa14.02□□□□□ -0.17
NEK6-212ENST00000539416 LIMCH1Q9UPQ0 1083 aa14.02□□□□□ -0.17
NEK6-212ENST00000539416 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.17
NEK6-212ENST00000539416 ATRNO75882 1429 aa14.02□□□□□ -0.17
NEK6-212ENST00000539416 TUBGCP6Q96RT7 1819 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 SKILP12757 684 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 ST5P78524 1137 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 SYTL4Q96C24 671 aaPredicted RBP14.01□□□□□ -0.17
NEK6-212ENST00000539416 LCMT1Q9UIC8 334 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 ZNF165P49910 485 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 TEX2Q8IWB9 1127 aa14.01□□□□□ -0.17
NEK6-212ENST00000539416 HMMRO75330 724 aa14□□□□□ -0.17
NEK6-212ENST00000539416 NOP2P46087 812 aaKnown RBP14□□□□□ -0.17
NEK6-212ENST00000539416 KRBA2Q6ZNG9 492 aa14□□□□□ -0.17
NEK6-212ENST00000539416 FERMT3Q86UX7 667 aa14□□□□□ -0.17
NEK6-212ENST00000539416 EFCC1Q9HA90 598 aa14□□□□□ -0.17
NEK6-212ENST00000539416 GYS2P54840 703 aa14□□□□□ -0.17
NEK6-212ENST00000539416 EIF4A1P60842 406 aaKnown RBP14□□□□□ -0.17
NEK6-212ENST00000539416 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
NEK6-212ENST00000539416 CABP4P57796 275 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 CCZ1BP86790 482 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 CCZ1P86791 482 aaPredicted RBP13.99□□□□□ -0.17
NEK6-212ENST00000539416 DDB1Q16531 1140 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 C10orf67Q8IYJ2 551 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 CCAR2Q8N163 923 aaKnown RBP13.99□□□□□ -0.17
NEK6-212ENST00000539416 SECISBP2LQ93073 1101 aaKnown RBP13.99□□□□□ -0.17
NEK6-212ENST00000539416 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 RASSF4Q9H2L5 321 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 TRPC5Q9UL62 973 aaPredicted RBP13.99□□□□□ -0.17
NEK6-212ENST00000539416 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 THSD7AQ9UPZ6 1657 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 GLI3P10071 1580 aa13.99□□□□□ -0.17
NEK6-212ENST00000539416 TOGARAM1Q9Y4F4 1720 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 CCDC69A6NI79 296 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 MAP4K4O95819 1239 aaPredicted RBP13.98□□□□□ -0.17
NEK6-212ENST00000539416 ST3GAL1Q11201 340 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 GJD4Q96KN9 370 aaPredicted RBP13.98□□□□□ -0.17
NEK6-212ENST00000539416 ZCCHC17Q9NP64 241 aaKnown RBP13.98□□□□□ -0.17
NEK6-212ENST00000539416 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
NEK6-212ENST00000539416 HOXB7P09629 217 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 CDC25BP30305 580 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
NEK6-212ENST00000539416 KCNQ3O43525 872 aa13.97□□□□□ -0.17
NEK6-212ENST00000539416 ONECUT3O60422 494 aaPredicted RBP13.97□□□□□ -0.17
NEK6-212ENST00000539416 ZRANB2O95218 330 aaKnown RBP eCLIP13.97□□□□□ -0.17
NEK6-212ENST00000539416 ARHGAP29Q52LW3 1261 aa13.97□□□□□ -0.17
NEK6-212ENST00000539416 RNF20Q5VTR2 975 aa13.97□□□□□ -0.17
NEK6-212ENST00000539416 F6X3S4 739 aa13.97□□□□□ -0.17
NEK6-212ENST00000539416 MYO1CO00159 1063 aa13.97□□□□□ -0.17
NEK6-212ENST00000539416 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
NEK6-212ENST00000539416 RBM43Q6ZSC3 357 aaKnown RBP13.97□□□□□ -0.17
NEK6-212ENST00000539416 TFIP11Q9UBB9 837 aaKnown RBP13.97□□□□□ -0.17
NEK6-212ENST00000539416 KRT85P78386 507 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 FAM98CQ17RN3 349 aaKnown RBP13.96□□□□□ -0.17
NEK6-212ENST00000539416 TXLNBQ8N3L3 684 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 NECAB1Q8N987 351 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 CLSTN2Q9H4D0 955 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 L2HGDHQ9H9P8 463 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 LRRFIP2Q9Y608 721 aaKnown RBP13.96□□□□□ -0.17
NEK6-212ENST00000539416 PAPPAQ13219 1627 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 NR1I2O75469 434 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 SEC31AO94979 1220 aaKnown RBP13.96□□□□□ -0.17
NEK6-212ENST00000539416 TEX35Q5T0J7 233 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 CDC37L1Q7L3B6 337 aa13.96□□□□□ -0.17
NEK6-212ENST00000539416 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
NEK6-212ENST00000539416 IQCB1Q15051 598 aa13.95□□□□□ -0.18
NEK6-212ENST00000539416 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
NEK6-212ENST00000539416 CCDC191Q8NCU4 936 aa13.95□□□□□ -0.18
NEK6-212ENST00000539416 PNMA6EA0A0J9YXQ4 647 aa13.95□□□□□ -0.18
NEK6-212ENST00000539416 NEMFO60524 1076 aa13.95□□□□□ -0.18
NEK6-212ENST00000539416 CCDC93Q567U6 631 aa13.95□□□□□ -0.18
NEK6-212ENST00000539416 QTRT2Q9H974 415 aaKnown RBP13.95□□□□□ -0.18
NEK6-212ENST00000539416 STAP2Q9UGK3 403 aa13.95□□□□□ -0.18
NEK6-212ENST00000539416 ITGB4P16144 1822 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 ZSCAN26Q16670 478 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 C11orf57Q6ZUT1 292 aaPredicted RBP13.94□□□□□ -0.18
NEK6-212ENST00000539416 LSG1Q9H089 658 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms