RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 GGA1Q9UJY5 639 aa24.34■■□□□ 1.49
TNFRSF1A-212ENST00000539372 F6X3S4 739 aa24.33■■□□□ 1.49
TNFRSF1A-212ENST00000539372 ECE2O60344 883 aa24.33■■□□□ 1.49
TNFRSF1A-212ENST00000539372 CDC5LQ99459 802 aaKnown RBP24.33■■□□□ 1.49
TNFRSF1A-212ENST00000539372 SHTN1A0MZ66 631 aa24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 PSMD14O00487 310 aa24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 LINS1Q8NG48 757 aa24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 ZC3H12CQ9C0D7 883 aaKnown RBP24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 KCNQ5Q9NR82 932 aa24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 ZBTB12Q9Y330 459 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 ZNF521Q96K83 1311 aa24.32■■□□□ 1.48
TNFRSF1A-212ENST00000539372 FMR1Q06787 632 aaKnown RBP eCLIP24.31■■□□□ 1.48
TNFRSF1A-212ENST00000539372 CASP7P55210 303 aa24.3■■□□□ 1.48
TNFRSF1A-212ENST00000539372 CNOT7Q9UIV1 285 aaKnown RBP24.3■■□□□ 1.48
TNFRSF1A-212ENST00000539372 XDHP47989 1333 aa24.3■■□□□ 1.48
TNFRSF1A-212ENST00000539372 CNTNAP1P78357 1384 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 RTL9Q8NET4 1388 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 CACNA1FO60840 1977 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 G3V3G9 751 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 DCAF8Q5TAQ9 597 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 MICALL2Q8IY33 904 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 TRPM4Q8TD43 1214 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 MYH3P11055 1940 aa24.29■■□□□ 1.48
TNFRSF1A-212ENST00000539372 PCNTO95613 3336 aa24.28■■□□□ 1.48
TNFRSF1A-212ENST00000539372 TRAF5O00463 557 aa24.28■■□□□ 1.48
TNFRSF1A-212ENST00000539372 PLA2G12BQ9BX93 195 aa24.28■■□□□ 1.48
TNFRSF1A-212ENST00000539372 BSDC1Q9NW68 430 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF1A-212ENST00000539372 WTIPA6NIX2 430 aaPredicted RBP24.27■■□□□ 1.48
TNFRSF1A-212ENST00000539372 H7C1D1 291 aa24.27■■□□□ 1.48
TNFRSF1A-212ENST00000539372 HIRAP54198 1017 aaPredicted RBP24.27■■□□□ 1.48
TNFRSF1A-212ENST00000539372 FAM161AQ3B820 660 aa24.27■■□□□ 1.48
TNFRSF1A-212ENST00000539372 BEND3Q5T5X7 828 aa24.27■■□□□ 1.48
TNFRSF1A-212ENST00000539372 MINPP1Q9UNW1 487 aa24.27■■□□□ 1.48
TNFRSF1A-212ENST00000539372 SPEF2Q9C093 1822 aa24.26■■□□□ 1.47
TNFRSF1A-212ENST00000539372 ITGA6P23229 1130 aa24.26■■□□□ 1.47
TNFRSF1A-212ENST00000539372 ATP2B4P23634 1241 aa24.26■■□□□ 1.47
TNFRSF1A-212ENST00000539372 HSPA1AP0DMV8 641 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1A-212ENST00000539372 HSPA1BP0DMV9 641 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1A-212ENST00000539372 IGHMBP2P38935 993 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1A-212ENST00000539372 DPF2Q92785 391 aa24.25■■□□□ 1.47
TNFRSF1A-212ENST00000539372 ABT1Q9ULW3 272 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1A-212ENST00000539372 VEGFBP49765 207 aa24.24■■□□□ 1.47
TNFRSF1A-212ENST00000539372 SAMD7Q7Z3H4 446 aa24.24■■□□□ 1.47
TNFRSF1A-212ENST00000539372 GLIS2Q9BZE0 524 aaPredicted RBP24.24■■□□□ 1.47
TNFRSF1A-212ENST00000539372 CSF1RP07333 972 aa24.23■■□□□ 1.47
TNFRSF1A-212ENST00000539372 SCN9AQ15858 1988 aa24.23■■□□□ 1.47
TNFRSF1A-212ENST00000539372 RPS12P25398 132 aaKnown RBP24.22■■□□□ 1.47
TNFRSF1A-212ENST00000539372 TBC1D10BQ4KMP7 808 aaPredicted RBP24.22■■□□□ 1.47
TNFRSF1A-212ENST00000539372 CST9Q5W186 159 aa24.22■■□□□ 1.47
TNFRSF1A-212ENST00000539372 SLC4A10Q6U841 1118 aa24.22■■□□□ 1.47
TNFRSF1A-212ENST00000539372 PGAP2Q9UHJ9 254 aa24.22■■□□□ 1.47
TNFRSF1A-212ENST00000539372 RASSF10A6NK89 507 aa24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 E9PSI1 815 aa24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 EGFRP00533 1210 aa24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 VIL1P09327 827 aaKnown RBP24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 CCT4P50991 539 aaKnown RBP24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 DEFB115Q30KQ5 88 aa24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 RBM26Q5T8P6 1007 aaKnown RBP24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 ZC3H15Q8WU90 426 aaKnown RBP24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 MPHOSPH8Q99549 860 aa24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 CHMP3Q9Y3E7 222 aa24.21■■□□□ 1.47
TNFRSF1A-212ENST00000539372 FOXO4P98177 505 aa24.2■■□□□ 1.46
TNFRSF1A-212ENST00000539372 ANKRD18BA2A2Z9 1011 aa24.19■■□□□ 1.46
TNFRSF1A-212ENST00000539372 IFFO2Q5TF58 517 aa24.19■■□□□ 1.46
TNFRSF1A-212ENST00000539372 MED23Q9ULK4 1368 aa24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 GRM8O00222 908 aa24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 CELF2O95319 508 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 SLFN5Q08AF3 891 aa24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 COL13A1Q5TAT6 717 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 RSBN1LQ6PCB5 846 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 MRPL50Q8N5N7 158 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 C9orf78Q9NZ63 289 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF1A-212ENST00000539372 EPHA10Q5JZY3 1008 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 CDC37L1Q7L3B6 337 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 USP48Q86UV5 1035 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 CDCA7LQ96GN5 454 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 SRCIN1Q9C0H9 1055 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 ZNF408Q9H9D4 720 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 LEMD3Q9Y2U8 911 aa24.17■■□□□ 1.46
TNFRSF1A-212ENST00000539372 TRPM7Q96QT4 1865 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 USP17L3A6NCW0 530 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 USP17L4A6NCW7 530 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 ALDH1L1O75891 902 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 KLRK1P26718 216 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 IFIT5Q13325 482 aaKnown RBP24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 KIF4BQ2VIQ3 1234 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 LMBR1LQ6UX01 489 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 DLK2Q6UY11 383 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 PAXIP1Q6ZW49 1069 aaPredicted RBP24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 USP17L1Q7RTZ2 530 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 PODNQ7Z5L7 613 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 TXNRD3Q86VQ6 643 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 ANKRD2Q9GZV1 360 aa24.16■■□□□ 1.46
TNFRSF1A-212ENST00000539372 ZNF804BA4D1E1 1349 aa24.15■■□□□ 1.46
TNFRSF1A-212ENST00000539372 WDR33Q9C0J8 1336 aaKnown RBP24.15■■□□□ 1.46
TNFRSF1A-212ENST00000539372 CCER2I3L3R5 266 aa24.15■■□□□ 1.46
TNFRSF1A-212ENST00000539372 CHRNDQ07001 517 aa24.15■■□□□ 1.46
TNFRSF1A-212ENST00000539372 AGBL3Q8NEM8 1001 aa24.15■■□□□ 1.46
TNFRSF1A-212ENST00000539372 KCNJ4P48050 445 aa24.14■■□□□ 1.45
TNFRSF1A-212ENST00000539372 GRM1Q13255 1194 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms