RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
CDCA3-207ENST00000538862 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
CDCA3-207ENST00000538862 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
CDCA3-207ENST00000538862 TJP1Q07157 1748 aa17.38■□□□□ 0.37
CDCA3-207ENST00000538862 ZNF831Q5JPB2 1677 aa17.38■□□□□ 0.37
CDCA3-207ENST00000538862 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
CDCA3-207ENST00000538862 OFD1O75665 1012 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 NEXNQ0ZGT2 675 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 IGKV5-2P06315 115 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 UBE2HP62256 183 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 UVSSAQ2YD98 709 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 CCDC39Q9UFE4 941 aa17.37■□□□□ 0.37
CDCA3-207ENST00000538862 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
CDCA3-207ENST00000538862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.36■□□□□ 0.37
CDCA3-207ENST00000538862 TPM2P07951 284 aa17.36■□□□□ 0.37
CDCA3-207ENST00000538862 PSMA5P28066 241 aa17.36■□□□□ 0.37
CDCA3-207ENST00000538862 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
CDCA3-207ENST00000538862 CSPP1Q1MSJ5 1256 aa17.36■□□□□ 0.37
CDCA3-207ENST00000538862 ADCK5Q3MIX3 580 aa17.36■□□□□ 0.37
CDCA3-207ENST00000538862 FOXD4L6Q3SYB3 417 aaPredicted RBP17.36■□□□□ 0.37
CDCA3-207ENST00000538862 CCDC183Q5T5S1 534 aa17.36■□□□□ 0.37
CDCA3-207ENST00000538862 FOXD4L3Q6VB84 417 aaPredicted RBP17.36■□□□□ 0.37
CDCA3-207ENST00000538862 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 CREB3L3Q68CJ9 461 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.35■□□□□ 0.37
CDCA3-207ENST00000538862 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 CNPY2Q9Y2B0 182 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 ZKSCAN5Q9Y2L8 839 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
CDCA3-207ENST00000538862 LARGE1O95461 756 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 CPA1P15085 419 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 GJB2P29033 226 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
CDCA3-207ENST00000538862 DNAJC10Q8IXB1 793 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 METTL22Q9BUU2 404 aaPredicted RBP17.35■□□□□ 0.37
CDCA3-207ENST00000538862 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.35■□□□□ 0.37
CDCA3-207ENST00000538862 UBR2Q8IWV8 1755 aa17.35■□□□□ 0.37
CDCA3-207ENST00000538862 TERF1P54274 439 aa17.34■□□□□ 0.37
CDCA3-207ENST00000538862 GCKRQ14397 625 aa17.34■□□□□ 0.37
CDCA3-207ENST00000538862 CCDC83Q8IWF9 413 aa17.34■□□□□ 0.37
CDCA3-207ENST00000538862 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
CDCA3-207ENST00000538862 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
CDCA3-207ENST00000538862 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
CDCA3-207ENST00000538862 RNF20Q5VTR2 975 aa17.33■□□□□ 0.37
CDCA3-207ENST00000538862 RNF214Q8ND24 703 aa17.33■□□□□ 0.37
CDCA3-207ENST00000538862 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
CDCA3-207ENST00000538862 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.36
CDCA3-207ENST00000538862 CRKLP46109 303 aaKnown RBP17.33■□□□□ 0.36
CDCA3-207ENST00000538862 KCNJ4P48050 445 aa17.33■□□□□ 0.36
CDCA3-207ENST00000538862 TTC5Q8N0Z6 440 aa17.33■□□□□ 0.36
CDCA3-207ENST00000538862 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
CDCA3-207ENST00000538862 FAM227BQ96M60 508 aa17.33■□□□□ 0.36
CDCA3-207ENST00000538862 MTMR6Q9Y217 621 aa17.33■□□□□ 0.36
CDCA3-207ENST00000538862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
CDCA3-207ENST00000538862 SLC27A2O14975 620 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 ANKRD1Q15327 319 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 ME3Q16798 604 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 COPRSQ9NQ92 184 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 COL15A1P39059 1388 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
CDCA3-207ENST00000538862 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
CDCA3-207ENST00000538862 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
CDCA3-207ENST00000538862 FHDC1Q9C0D6 1143 aaPredicted RBP17.31■□□□□ 0.36
CDCA3-207ENST00000538862 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
CDCA3-207ENST00000538862 MED23Q9ULK4 1368 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 POLD1P28340 1107 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 TLR7Q9NYK1 1049 aaKnown RBP17.31■□□□□ 0.36
CDCA3-207ENST00000538862 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
CDCA3-207ENST00000538862 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
CDCA3-207ENST00000538862 MYL6BP14649 208 aa17.3■□□□□ 0.36
CDCA3-207ENST00000538862 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
CDCA3-207ENST00000538862 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
CDCA3-207ENST00000538862 LRP10Q7Z4F1 713 aa17.3■□□□□ 0.36
CDCA3-207ENST00000538862 MYD88Q99836 296 aa17.3■□□□□ 0.36
CDCA3-207ENST00000538862 SIL1Q9H173 461 aa17.3■□□□□ 0.36
CDCA3-207ENST00000538862 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 C4AP0C0L4 1744 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 RPS6KA4O75676 772 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 ATP5JP18859 108 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 PDCP20941 246 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 INTS5Q6P9B9 1019 aaKnown RBP17.29■□□□□ 0.36
CDCA3-207ENST00000538862 BLOC1S2Q6QNY1 142 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
CDCA3-207ENST00000538862 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 UTRNP46939 3433 aa17.29■□□□□ 0.36
CDCA3-207ENST00000538862 GOLGB1Q14789 3259 aaKnown RBP17.28■□□□□ 0.36
CDCA3-207ENST00000538862 RFX7Q2KHR2 1363 aa17.28■□□□□ 0.36
CDCA3-207ENST00000538862 FIBPO43427 364 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms