RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 NTSR2O95665 410 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 ADORA1P30542 326 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 ATP2B3Q16720 1220 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 TTC39AQ5SRH9 613 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 ZSWIM6Q9HCJ5 1215 aa17.79■□□□□ 0.44
ATL3-203ENST00000538786 SLC27A2O14975 620 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
ATL3-203ENST00000538786 CASTP20810 708 aaKnown RBP17.78■□□□□ 0.44
ATL3-203ENST00000538786 GSE1Q14687 1217 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 CLEC17AQ6ZS10 378 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 VGLL2Q8N8G2 317 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 JAKMIP1Q96N16 626 aaKnown RBP17.78■□□□□ 0.44
ATL3-203ENST00000538786 AFF2P51816 1311 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 MYH3P11055 1940 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 LRP5O75197 1615 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 SPEF2Q9C093 1822 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
ATL3-203ENST00000538786 SSFA2P28290 1259 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 RC3H1Q5TC82 1133 aaKnown RBP17.78■□□□□ 0.44
ATL3-203ENST00000538786 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 HMG20BQ9P0W2 317 aa17.78■□□□□ 0.44
ATL3-203ENST00000538786 NHSQ6T4R5 1651 aa17.77■□□□□ 0.44
ATL3-203ENST00000538786 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
ATL3-203ENST00000538786 CYP2E1P05181 493 aaPredicted RBP17.77■□□□□ 0.44
ATL3-203ENST00000538786 ADCK5Q3MIX3 580 aa17.77■□□□□ 0.44
ATL3-203ENST00000538786 VPS53Q5VIR6 699 aa17.77■□□□□ 0.44
ATL3-203ENST00000538786 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
ATL3-203ENST00000538786 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
ATL3-203ENST00000538786 PDE8BO95263 885 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 PSMA5P28066 241 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 AK2P54819 239 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 MROH5Q6ZUA9 1318 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 RTL9Q8NET4 1388 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 RPAP1Q9BWH6 1393 aaPredicted RBP17.76■□□□□ 0.43
ATL3-203ENST00000538786 CHGBP05060 677 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 KCNQ4P56696 695 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 LRRFIP1Q32MZ4 808 aaKnown RBP17.76■□□□□ 0.43
ATL3-203ENST00000538786 TSGA10IPQ3SY00 556 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 ZMYM1Q5SVZ6 1142 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 RUFY3Q7L099 469 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 ZNF512BQ96KM6 892 aaPredicted RBP17.76■□□□□ 0.43
ATL3-203ENST00000538786 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
ATL3-203ENST00000538786 LIMCH1Q9UPQ0 1083 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
ATL3-203ENST00000538786 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
ATL3-203ENST00000538786 ATRNO75882 1429 aa17.75■□□□□ 0.43
ATL3-203ENST00000538786 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
ATL3-203ENST00000538786 FKBP4Q02790 459 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATL3-203ENST00000538786 PDRG1Q9NUG6 133 aa17.75■□□□□ 0.43
ATL3-203ENST00000538786 TRPC5Q9UL62 973 aaPredicted RBP17.75■□□□□ 0.43
ATL3-203ENST00000538786 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
ATL3-203ENST00000538786 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
ATL3-203ENST00000538786 BTAF1O14981 1849 aa17.74■□□□□ 0.43
ATL3-203ENST00000538786 CPA1P15085 419 aa17.74■□□□□ 0.43
ATL3-203ENST00000538786 PTMSP20962 102 aa17.74■□□□□ 0.43
ATL3-203ENST00000538786 PUM3Q15397 648 aaKnown RBP17.74■□□□□ 0.43
ATL3-203ENST00000538786 CCDC129Q6ZRS4 1044 aa17.74■□□□□ 0.43
ATL3-203ENST00000538786 CCNL1Q9UK58 526 aaPredicted RBP17.74■□□□□ 0.43
ATL3-203ENST00000538786 KRT32Q14532 448 aa17.73■□□□□ 0.43
ATL3-203ENST00000538786 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
ATL3-203ENST00000538786 ZFYP08048 801 aaPredicted RBP17.72■□□□□ 0.43
ATL3-203ENST00000538786 PKP1Q13835 747 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 SCARF1Q14162 830 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 LPIN2Q92539 896 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 FGFR2P21802 821 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 ZAP70P43403 619 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 DSCC1Q9BVC3 393 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 LAMB2P55268 1798 aa17.72■□□□□ 0.43
ATL3-203ENST00000538786 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
ATL3-203ENST00000538786 TRAK2O60296 914 aa17.71■□□□□ 0.43
ATL3-203ENST00000538786 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
ATL3-203ENST00000538786 ZSCAN31Q96LW9 406 aaPredicted RBP17.71■□□□□ 0.43
ATL3-203ENST00000538786 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.43
ATL3-203ENST00000538786 ZDHHC9Q9Y397 364 aa17.71■□□□□ 0.43
ATL3-203ENST00000538786 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 GNPATO15228 680 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
ATL3-203ENST00000538786 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
ATL3-203ENST00000538786 MCAMP43121 646 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
ATL3-203ENST00000538786 SCN7AQ01118 1682 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 MAST3O60307 1309 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 SLFNL1Q499Z3 407 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 TAF6LQ9Y6J9 622 aa17.7■□□□□ 0.42
ATL3-203ENST00000538786 UQCRFS1P1P0C7P4 283 aa17.69■□□□□ 0.42
ATL3-203ENST00000538786 SLC5A1P13866 664 aa17.69■□□□□ 0.42
ATL3-203ENST00000538786 RPS6KB1P23443 525 aa17.69■□□□□ 0.42
ATL3-203ENST00000538786 ARID4AP29374 1257 aaPredicted RBP17.69■□□□□ 0.42
ATL3-203ENST00000538786 ERFEQ4G0M1 354 aa17.69■□□□□ 0.42
ATL3-203ENST00000538786 CCDC102BQ68D86 513 aa17.69■□□□□ 0.42
ATL3-203ENST00000538786 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms