RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MAP3K2Q9Y2U5 619 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
DDB1-212ENST00000538470 XDHP47989 1333 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 TRAF5O00463 557 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 PSMD14O00487 310 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 UFL1O94874 794 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 CTSWP56202 376 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 TWISTNBQ3B726 338 aaPredicted RBP11.1□□□□□ -0.63
DDB1-212ENST00000538470 ANKRD18AQ8IVF6 992 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
DDB1-212ENST00000538470 SEC31BQ9NQW1 1179 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 CNOT7Q9UIV1 285 aaKnown RBP11.1□□□□□ -0.63
DDB1-212ENST00000538470 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
DDB1-212ENST00000538470 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 ANP32CO43423 234 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
DDB1-212ENST00000538470 CCDC184Q52MB2 194 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 CST9Q5W186 159 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 CDC37L1Q7L3B6 337 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 CAPNS2Q96L46 248 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 GLIS2Q9BZE0 524 aaPredicted RBP11.09□□□□□ -0.63
DDB1-212ENST00000538470 ZC3H12CQ9C0D7 883 aaKnown RBP11.09□□□□□ -0.63
DDB1-212ENST00000538470 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
DDB1-212ENST00000538470 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
DDB1-212ENST00000538470 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
DDB1-212ENST00000538470 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
DDB1-212ENST00000538470 HIRAP54198 1017 aaPredicted RBP11.08□□□□□ -0.64
DDB1-212ENST00000538470 FMR1Q06787 632 aaKnown RBP eCLIP11.08□□□□□ -0.642e-7■■■□□ 15.3
DDB1-212ENST00000538470 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
DDB1-212ENST00000538470 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
DDB1-212ENST00000538470 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
DDB1-212ENST00000538470 G3V3G9 751 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 VIL1P09327 827 aaKnown RBP11.07□□□□□ -0.64
DDB1-212ENST00000538470 HSPA8P11142 646 aaKnown RBP11.07□□□□□ -0.64
DDB1-212ENST00000538470 ATP2B4P23634 1241 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 MAP2K2P36507 400 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 FLIIQ13045 1269 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 CYP4F22Q6NT55 531 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 WDR63Q8IWG1 891 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
DDB1-212ENST00000538470 GPR101Q96P66 508 aaPredicted RBP11.07□□□□□ -0.64
DDB1-212ENST00000538470 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 SHTN1A0MZ66 631 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
DDB1-212ENST00000538470 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 KIF4BQ2VIQ3 1234 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
DDB1-212ENST00000538470 BEGAINQ9BUH8 593 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 PLA2G12BQ9BX93 195 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
DDB1-212ENST00000538470 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
DDB1-212ENST00000538470 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 H7C1W4 665 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 CA12O43570 354 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 LBX1P52954 281 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 ZNF280AP59817 542 aaPredicted RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 FKBP5Q13451 457 aaPredicted RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 RSBN1LQ6PCB5 846 aaPredicted RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 G2E3Q7L622 706 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 TTLL11Q8NHH1 800 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 JARID2Q92833 1246 aaPredicted RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 DCPSQ96C86 337 aaKnown RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 CCDC85AQ96PX6 553 aaPredicted RBP11.05□□□□□ -0.64
DDB1-212ENST00000538470 GREM2Q9H772 168 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 AKAP11Q9UKA4 1901 aa11.05□□□□□ -0.64
DDB1-212ENST00000538470 CAPN15O75808 1086 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 IGHMBP2P38935 993 aaKnown RBP11.04□□□□□ -0.64
DDB1-212ENST00000538470 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
DDB1-212ENST00000538470 GCKRQ14397 625 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 GGA3Q9NZ52 723 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 MYO3BQ8WXR4 1341 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
DDB1-212ENST00000538470 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 EGFRP00533 1210 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 CASP7P55210 303 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 NOGQ13253 232 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 GRM1Q13255 1194 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 MINPP1Q9UNW1 487 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 LEMD3Q9Y2U8 911 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms