RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 USP48Q86UV5 1035 aa16.73■□□□□ 0.27
LIMK1-208ENST00000538333 TCEANC2Q96MN5 208 aa16.73■□□□□ 0.27
LIMK1-208ENST00000538333 GDPD2Q9HCC8 539 aa16.73■□□□□ 0.27
LIMK1-208ENST00000538333 CEP126Q9P2H0 1117 aa16.73■□□□□ 0.27
LIMK1-208ENST00000538333 EXOC5O00471 708 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 NASPP49321 788 aaPredicted RBP16.72■□□□□ 0.27
LIMK1-208ENST00000538333 HELLSQ9NRZ9 838 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 NRAPQ86VF7 1730 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 CYP21A2P08686 494 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 IFIT1P09914 478 aaKnown RBP16.72■□□□□ 0.27
LIMK1-208ENST00000538333 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
LIMK1-208ENST00000538333 ZMYM1Q5SVZ6 1142 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 ZBTB1Q9Y2K1 713 aa16.72■□□□□ 0.27
LIMK1-208ENST00000538333 GADD45BO75293 160 aaPredicted RBP16.71■□□□□ 0.27
LIMK1-208ENST00000538333 SLFNL1Q499Z3 407 aa16.71■□□□□ 0.27
LIMK1-208ENST00000538333 DTNBO60941 627 aa16.71■□□□□ 0.27
LIMK1-208ENST00000538333 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
LIMK1-208ENST00000538333 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
LIMK1-208ENST00000538333 NEK1Q96PY6 1258 aa16.71■□□□□ 0.27
LIMK1-208ENST00000538333 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.27
LIMK1-208ENST00000538333 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.26
LIMK1-208ENST00000538333 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
LIMK1-208ENST00000538333 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
LIMK1-208ENST00000538333 DSCC1Q9BVC3 393 aa16.7■□□□□ 0.26
LIMK1-208ENST00000538333 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
LIMK1-208ENST00000538333 RRAGDQ9NQL2 400 aaPredicted RBP16.7■□□□□ 0.26
LIMK1-208ENST00000538333 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
LIMK1-208ENST00000538333 SYCE3A1L190 88 aa16.7■□□□□ 0.26
LIMK1-208ENST00000538333 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
LIMK1-208ENST00000538333 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
LIMK1-208ENST00000538333 GPTP24298 496 aa16.69■□□□□ 0.26
LIMK1-208ENST00000538333 ADORA1P30542 326 aa16.69■□□□□ 0.26
LIMK1-208ENST00000538333 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
LIMK1-208ENST00000538333 XAGE2Q96GT9 111 aa16.69■□□□□ 0.26
LIMK1-208ENST00000538333 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
LIMK1-208ENST00000538333 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 RIPOR2Q9Y4F9 1068 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 MAST3O60307 1309 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 MYH7P12883 1935 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 PDIA4P13667 645 aaKnown RBP16.68■□□□□ 0.26
LIMK1-208ENST00000538333 IL6STP40189 918 aaPredicted RBP16.68■□□□□ 0.26
LIMK1-208ENST00000538333 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
LIMK1-208ENST00000538333 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
LIMK1-208ENST00000538333 ERVV-1B6SEH8 477 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 CTSWP56202 376 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 CCDC158Q5M9N0 1113 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 GREM2Q9H772 168 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 HSPD1P10809 573 aaKnown RBP16.67■□□□□ 0.26
LIMK1-208ENST00000538333 ITGA6P23229 1130 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 TAF7LQ5H9L4 462 aa16.67■□□□□ 0.26
LIMK1-208ENST00000538333 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
LIMK1-208ENST00000538333 SLIT2O94813 1529 aa16.66■□□□□ 0.26
LIMK1-208ENST00000538333 SPATA31A1Q5TZJ5 1347 aa16.66■□□□□ 0.26
LIMK1-208ENST00000538333 TTC39AQ5SRH9 613 aa16.66■□□□□ 0.26
LIMK1-208ENST00000538333 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
LIMK1-208ENST00000538333 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
LIMK1-208ENST00000538333 UBN2Q6ZU65 1347 aa16.66■□□□□ 0.26
LIMK1-208ENST00000538333 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
LIMK1-208ENST00000538333 LRP5O75197 1615 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 TOM1O60784 492 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 UBE2HP62256 183 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 SCARF1Q14162 830 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 Q6ZUG5 572 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 RREB1Q92766 1687 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 NWD2Q9ULI1 1742 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 M0R2C6 588 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 PDCP20941 246 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 DZIP3Q86Y13 1208 aaKnown RBP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 OSBP2Q969R2 916 aa16.65■□□□□ 0.26
LIMK1-208ENST00000538333 THRAP3Q9Y2W1 955 aaKnown RBP16.65■□□□□ 0.26
LIMK1-208ENST00000538333 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
LIMK1-208ENST00000538333 GORABQ5T7V8 394 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
LIMK1-208ENST00000538333 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 FIBPO43427 364 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 STK3Q13188 491 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 ATP2B3Q16720 1220 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 AGXT2Q9BYV1 514 aa16.64■□□□□ 0.25
LIMK1-208ENST00000538333 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
LIMK1-208ENST00000538333 FOXP2O15409 715 aa16.63■□□□□ 0.25
LIMK1-208ENST00000538333 PDE8AO60658 829 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms